This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1iow

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:27, 9 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1iow' size='340' side='right'caption='[[1iow]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='1iow' size='340' side='right'caption='[[1iow]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1iow]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IOW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IOW FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1iow]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IOW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IOW FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PHY:1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC+ACID'>PHY</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/D-alanine--D-alanine_ligase D-alanine--D-alanine ligase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.2.4 6.3.2.4] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PHY:1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC+ACID'>PHY</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1iow FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iow OCA], [https://pdbe.org/1iow PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1iow RCSB], [https://www.ebi.ac.uk/pdbsum/1iow PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1iow ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1iow FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iow OCA], [https://pdbe.org/1iow PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1iow RCSB], [https://www.ebi.ac.uk/pdbsum/1iow PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1iow ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/DDLB_ECOLI DDLB_ECOLI]] Cell wall formation.
+
[https://www.uniprot.org/uniprot/DDLB_ECOLI DDLB_ECOLI] Cell wall formation.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 36: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus coli migula 1895]]
+
[[Category: Escherichia coli]]
-
[[Category: D-alanine--D-alanine ligase]]
+
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Fan, C]]
+
[[Category: Fan C]]
-
[[Category: Knox, J R]]
+
[[Category: Knox JR]]
-
[[Category: Moews, P C]]
+
[[Category: Moews PC]]
-
[[Category: Adp binding]]
+
-
[[Category: Cell wall]]
+
-
[[Category: Glycogen phosphorylase]]
+
-
[[Category: Ligase]]
+
-
[[Category: Peptidoglycan synthesis]]
+
-
[[Category: Vancomycin]]
+

Current revision

COMPLEX OF Y216F D-ALA:D-ALA LIGASE WITH ADP AND A PHOSPHORYL PHOSPHINATE

PDB ID 1iow

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1iow"
Personal tools