|
|
Line 3: |
Line 3: |
| <StructureSection load='5h6i' size='340' side='right'caption='[[5h6i]], [[Resolution|resolution]] 2.45Å' scene=''> | | <StructureSection load='5h6i' size='340' side='right'caption='[[5h6i]], [[Resolution|resolution]] 2.45Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[5h6i]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"streptoccocus_de_la_mammite"_nocard_and_mollereau_1887 "streptoccocus de la mammite" nocard and mollereau 1887]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5H6I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5H6I FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5h6i]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_agalactiae Streptococcus agalactiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5H6I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5H6I FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5h6i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5h6i OCA], [http://pdbe.org/5h6i PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5h6i RCSB], [http://www.ebi.ac.uk/pdbsum/5h6i PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5h6i ProSAT]</span></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5h6i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5h6i OCA], [https://pdbe.org/5h6i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5h6i RCSB], [https://www.ebi.ac.uk/pdbsum/5h6i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5h6i ProSAT]</span></td></tr> |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[http://www.uniprot.org/uniprot/PROB_STRAG PROB_STRAG]] Protein B belongs to the group of bacterial Fc-binding protein. | + | [https://www.uniprot.org/uniprot/PROB_STRAG PROB_STRAG] Protein B belongs to the group of bacterial Fc-binding protein. |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
Line 22: |
Line 23: |
| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Streptoccocus de la mammite nocard and mollereau 1887]] | |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Brefo-Mensah, E K]] | + | [[Category: Streptococcus agalactiae]] |
- | [[Category: Jin, T C]] | + | [[Category: Brefo-Mensah EK]] |
- | [[Category: Pore forming toxin]] | + | [[Category: Jin TC]] |
- | [[Category: Toxin]]
| + | |
| Structural highlights
Function
PROB_STRAG Protein B belongs to the group of bacterial Fc-binding protein.
Publication Abstract from PubMed
Streptococcus agalactiae is an important human opportunistic pathogen that can cause serious health problems, particularly among newborns and older individuals. S. agalactiae contains the CAMP factor, a pore-forming toxin first identified in this bacterium. The CAMP reaction is based on the co-hemolytic activity of the CAMP factor and is commonly used to identify S. agalactiae in the clinic. Closely related proteins are present also in other Gram-positive pathogens. Although the CAMP toxin was discovered more than a half century ago, no structure from this toxin family has been reported, and the mechanism of action of this toxin remains unclear. Here, we report the first structure of this toxin family, revealing a structural fold composed of 5 + 3-helix bundles. Further analysis by protein truncation and site-directed mutagenesis indicated that the N-terminal 5-helix bundle is responsible for membrane permeabilization, whereas the C-terminal 3-helix bundle is likely responsible for host receptor binding. Interestingly, the C-terminal domain inhibited the activity of both full-length toxin and its N-terminal domain. Moreover, we observed that the linker region is highly conserved and has a conserved DLXXXDXAT sequence motif. Structurally, this linker region extensively interacted with both terminal CAMP factor domains, and mutagenesis disclosed that the conserved sequence motif is required for CAMP factor's co-hemolytic activity. In conclusion, our results reveal a unique structure of this bacterial toxin and help clarify the molecular mechanism of its co-hemolytic activity.
Crystal structure of the Streptococcus agalactiae CAMP factor provides insights into its membrane-permeabilizing activity.,Jin T, Brefo-Mensah E, Fan W, Zeng W, Li Y, Zhang Y, Palmer M J Biol Chem. 2018 Jul 27;293(30):11867-11877. doi: 10.1074/jbc.RA118.002336. Epub, 2018 Jun 8. PMID:29884770[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Jin T, Brefo-Mensah E, Fan W, Zeng W, Li Y, Zhang Y, Palmer M. Crystal structure of the Streptococcus agalactiae CAMP factor provides insights into its membrane-permeabilizing activity. J Biol Chem. 2018 Jul 27;293(30):11867-11877. doi: 10.1074/jbc.RA118.002336. Epub, 2018 Jun 8. PMID:29884770 doi:http://dx.doi.org/10.1074/jbc.RA118.002336
|