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| <StructureSection load='5hdl' size='340' side='right'caption='[[5hdl]], [[Resolution|resolution]] 2.39Å' scene=''> | | <StructureSection load='5hdl' size='340' side='right'caption='[[5hdl]], [[Resolution|resolution]] 2.39Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[5hdl]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Lacrg Lacrg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HDL OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5HDL FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5hdl]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Lacticaseibacillus_rhamnosus_GG Lacticaseibacillus rhamnosus GG]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HDL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HDL FirstGlance]. <br> |
- | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5f44|5f44]], [[5faa|5faa]], [[5fgs|5fgs]], [[5fgr|5fgr]], [[5fie|5fie]], [[5hbb|5hbb]], [[5hts|5hts]], [[5j4m|5j4m]]</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.39Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LRHM_0426 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=568703 LACRG])</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5hdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hdl OCA], [https://pdbe.org/5hdl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5hdl RCSB], [https://www.ebi.ac.uk/pdbsum/5hdl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5hdl ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5hdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hdl OCA], [http://pdbe.org/5hdl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5hdl RCSB], [http://www.ebi.ac.uk/pdbsum/5hdl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5hdl ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Lacrg]] | + | [[Category: Lacticaseibacillus rhamnosus GG]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Chaurasia, P]] | + | [[Category: Chaurasia P]] |
- | [[Category: Krishnan, V]] | + | [[Category: Krishnan V]] |
- | [[Category: Ossowski, I von]]
| + | [[Category: Palva A]] |
- | [[Category: Palva, A]] | + | [[Category: Pratap S]] |
- | [[Category: Pratap, S]] | + | [[Category: Von Ossowski I]] |
- | [[Category: Adhesin]] | + | |
- | [[Category: Cell adhesion]]
| + | |
- | [[Category: Isopeptide]]
| + | |
- | [[Category: Pilin]]
| + | |
- | [[Category: Probiotic]]
| + | |
- | [[Category: Spaa]]
| + | |
- | [[Category: Spacba pili]]
| + | |
| Structural highlights
Publication Abstract from PubMed
Thus far, all solved structures of pilin-proteins comprising sortase-assembled pili are from pathogenic genera and species. Here, we present the first crystal structure of a pilin subunit (SpaA) from a non-pathogen host (Lactobacillus rhamnosus GG). SpaA consists of two tandem CnaB-type domains, each with an isopeptide bond and E-box motif. Intriguingly, while the isopeptide bond in the N-terminal domain forms between lysine and asparagine, the one in the C-terminal domain atypically involves aspartate. We also solved crystal structures of mutant proteins where residues implicated in forming isopeptide bonds were replaced. Expectedly, the E-box-substituted E139A mutant lacks an isopeptide bond in the N-terminal domain. However, the C-terminal E269A substitution gave two structures; one of both domains with their isopeptide bonds present, and another of only the N-terminal domain, but with an unformed isopeptide bond and significant conformational changes. This latter crystal structure has never been observed for any other Gram-positive pilin. Notably, the C-terminal isopeptide bond still forms in D295N-substituted SpaA, irrespective of E269 being present or absent. Although E-box mutations affect SpaA proteolytic and thermal stability, a cumulative effect perturbing normal pilus polymerization was unobserved. A model showing the polymerized arrangement of SpaA within the SpaCBA pilus is proposed.
New insights about pilus formation in gut-adapted Lactobacillus rhamnosus GG from the crystal structure of the SpaA backbone-pilin subunit.,Chaurasia P, Pratap S, von Ossowski I, Palva A, Krishnan V Sci Rep. 2016 Jun 28;6:28664. doi: 10.1038/srep28664. PMID:27349405[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Chaurasia P, Pratap S, von Ossowski I, Palva A, Krishnan V. New insights about pilus formation in gut-adapted Lactobacillus rhamnosus GG from the crystal structure of the SpaA backbone-pilin subunit. Sci Rep. 2016 Jun 28;6:28664. doi: 10.1038/srep28664. PMID:27349405 doi:http://dx.doi.org/10.1038/srep28664
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