5hfd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='5hfd' size='340' side='right'caption='[[5hfd]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='5hfd' size='340' side='right'caption='[[5hfd]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5hfd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HFD OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5HFD FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5hfd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HFD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HFD FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1bfe|1bfe]], [[5hdy|5hdy]], [[5heb|5heb]], [[5hed|5hed]], [[5het|5het]], [[5hey|5hey]], [[5hf1|5hf1]], [[5hf4|5hf4]], [[5hfb|5hfb]], [[5hfc|5hfc]], [[5hfe|5hfe]], [[5hff|5hff]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Dlg4, Dlgh4, Psd95 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5hfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hfd OCA], [https://pdbe.org/5hfd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5hfd RCSB], [https://www.ebi.ac.uk/pdbsum/5hfd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5hfd ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5hfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hfd OCA], [http://pdbe.org/5hfd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5hfd RCSB], [http://www.ebi.ac.uk/pdbsum/5hfd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5hfd ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/DLG4_RAT DLG4_RAT]] Interacts with the cytoplasmic tail of NMDA receptor subunits and shaker-type potassium channels. Required for synaptic plasticity associated with NMDA receptor signaling. Overexpression or depletion of DLG4 changes the ratio of excitatory to inhibitory synapses in hippocampal neurons. May reduce the amplitude of ASIC3 acid-evoked currents by retaining the channel intracellularly. May regulate the intracellular trafficking of ADR1B.<ref>PMID:15317815</ref> <ref>PMID:15358863</ref>
+
[https://www.uniprot.org/uniprot/DLG4_RAT DLG4_RAT] Interacts with the cytoplasmic tail of NMDA receptor subunits and shaker-type potassium channels. Required for synaptic plasticity associated with NMDA receptor signaling. Overexpression or depletion of DLG4 changes the ratio of excitatory to inhibitory synapses in hippocampal neurons. May reduce the amplitude of ASIC3 acid-evoked currents by retaining the channel intracellularly. May regulate the intracellular trafficking of ADR1B.<ref>PMID:15317815</ref> <ref>PMID:15358863</ref>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Buffalo rat]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Raman, A S]]
+
[[Category: Rattus norvegicus]]
-
[[Category: Ranganathan, R]]
+
[[Category: Raman AS]]
-
[[Category: White, K I]]
+
[[Category: Ranganathan R]]
-
[[Category: Adhesion]]
+
[[Category: White KI]]
-
[[Category: Dhr]]
+
-
[[Category: Glgf]]
+
-
[[Category: Pdz]]
+
-
[[Category: Peptide binding protein]]
+
-
[[Category: Peptide-binding domain]]
+
-
[[Category: Synapse]]
+
-
[[Category: Synaptic density]]
+

Revision as of 07:34, 9 August 2023

The third PDZ domain from the synaptic protein PSD-95 (G330T, H372A double mutant)

PDB ID 5hfd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools