5hj5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:38, 9 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5hj5' size='340' side='right'caption='[[5hj5]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='5hj5' size='340' side='right'caption='[[5hj5]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5hj5]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibch Vibch]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HJ5 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5HJ5 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5hj5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HJ5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HJ5 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=BG6:BETA-D-GLUCOSE-6-PHOSPHATE'>BG6</scene>, <scene name='pdbligand=F6R:FRUCTOSE+-6-PHOSPHATE'>F6R</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nagB, VC_A1025 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243277 VIBCH])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=BG6:BETA-D-GLUCOSE-6-PHOSPHATE'>BG6</scene>, <scene name='pdbligand=F6R:FRUCTOSE+-6-PHOSPHATE'>F6R</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucosamine-6-phosphate_deaminase Glucosamine-6-phosphate deaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.99.6 3.5.99.6] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5hj5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hj5 OCA], [https://pdbe.org/5hj5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5hj5 RCSB], [https://www.ebi.ac.uk/pdbsum/5hj5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5hj5 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5hj5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hj5 OCA], [http://pdbe.org/5hj5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5hj5 RCSB], [http://www.ebi.ac.uk/pdbsum/5hj5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5hj5 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/NAGB_VIBCH NAGB_VIBCH]] Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion (By similarity).
+
[https://www.uniprot.org/uniprot/NAGB_VIBCH NAGB_VIBCH] Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion (By similarity).
==See Also==
==See Also==
Line 16: Line 15:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Glucosamine-6-phosphate deaminase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Vibch]]
+
[[Category: Vibrio cholerae O1 biovar El Tor str. N16961]]
-
[[Category: Anderson, W F]]
+
[[Category: Anderson WF]]
-
[[Category: Structural genomic]]
+
[[Category: Chang C]]
-
[[Category: Chang, C]]
+
[[Category: Joachimiak A]]
-
[[Category: Joachimiak, A]]
+
[[Category: Kim Y]]
-
[[Category: Kim, Y]]
+
[[Category: Kwon K]]
-
[[Category: Kwon, K]]
+
[[Category: Maltseva N]]
-
[[Category: Maltseva, N]]
+
-
[[Category: Csgid]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Vibrio cholerae]]
+

Current revision

Crystal structure of tertiary complex of glucosamine-6-phosphate deaminase from Vibrio cholerae with BETA-D-GLUCOSE-6-PHOSPHATE and FRUCTOSE-6-PHOSPHATE

PDB ID 5hj5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools