This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1khp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:58, 16 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1khp' size='340' side='right'caption='[[1khp]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='1khp' size='340' side='right'caption='[[1khp]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1khp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Carpa Carpa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KHP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KHP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1khp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Carica_papaya Carica papaya]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KHP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KHP FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=0HQ:DIAZOMETHANE'>0HQ</scene>, <scene name='pdbligand=PHQ:BENZYL+CHLOROCARBONATE'>PHQ</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1pad|1pad]], [[5pad|5pad]], [[6pad|6pad]], [[9pap|9pap]], [[1ppn|1ppn]], [[2pad|2pad]], [[1pe6|1pe6]], [[1pip|1pip]], [[1ppp|1ppp]], [[1ppd|1ppd]], [[1pop|1pop]], [[1stf|1stf]], [[1cvz|1cvz]], [[1khq|1khq]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0HQ:DIAZOMETHANE'>0HQ</scene>, <scene name='pdbligand=PHQ:BENZYL+CHLOROCARBONATE'>PHQ</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Papain Papain], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.22.2 3.4.22.2] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1khp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1khp OCA], [https://pdbe.org/1khp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1khp RCSB], [https://www.ebi.ac.uk/pdbsum/1khp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1khp ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1khp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1khp OCA], [https://pdbe.org/1khp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1khp RCSB], [https://www.ebi.ac.uk/pdbsum/1khp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1khp ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PAPA1_CARPA PAPA1_CARPA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 35: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Carpa]]
+
[[Category: Carica papaya]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Papain]]
+
[[Category: Grzonka Z]]
-
[[Category: Grzonka, Z]]
+
[[Category: Jankowska E]]
-
[[Category: Jankowska, E]]
+
[[Category: Janowski R]]
-
[[Category: Janowski, R]]
+
[[Category: Jaskolski M]]
-
[[Category: Jaskolski, M]]
+
[[Category: Kozak M]]
-
[[Category: Kozak, M]]
+
-
[[Category: Diazomethylketone inhibitor]]
+
-
[[Category: Hydrolase-hydrolase inhibitor complex]]
+
-
[[Category: Irreversible inhibitor]]
+
-
[[Category: Protease inhibitor]]
+

Current revision

Monoclinic form of papain/ZLFG-DAM covalent complex

PDB ID 1khp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools