1kzd

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<StructureSection load='1kzd' size='340' side='right'caption='[[1kzd]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='1kzd' size='340' side='right'caption='[[1kzd]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1kzd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KZD OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1KZD FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1kzd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KZD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KZD FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1rdo|1rdo]], [[1kza|1kza]], [[1kzb|1kzb]], [[1kzc|1kzc]], [[1kze|1kze]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MBL1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kzd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kzd OCA], [https://pdbe.org/1kzd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kzd RCSB], [https://www.ebi.ac.uk/pdbsum/1kzd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kzd ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1kzd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kzd OCA], [http://pdbe.org/1kzd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1kzd RCSB], [http://www.ebi.ac.uk/pdbsum/1kzd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1kzd ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/MBL2_RAT MBL2_RAT]] Calcium-dependent lectin involved in innate immune defense. Binds mannose, fucose and N-acetylglucosamine on different microorganisms and activates the lectin complement pathway. Binds to late apoptotic cells, as well as to apoptotic blebs and to necrotic cells, but not to early apoptotic cells, facilitating their uptake by macrophages (By similarity).
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[https://www.uniprot.org/uniprot/MBL2_RAT MBL2_RAT] Calcium-dependent lectin involved in innate immune defense. Binds mannose, fucose and N-acetylglucosamine on different microorganisms and activates the lectin complement pathway. Binds to late apoptotic cells, as well as to apoptotic blebs and to necrotic cells, but not to early apoptotic cells, facilitating their uptake by macrophages (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Buffalo rat]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Clark, D A]]
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[[Category: Rattus norvegicus]]
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[[Category: Drickamer, K]]
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[[Category: Clark DA]]
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[[Category: Feinberg, H]]
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[[Category: Drickamer K]]
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[[Category: Kolatkar, A R]]
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[[Category: Feinberg H]]
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[[Category: Ng, K K]]
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[[Category: Kolatkar AR]]
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[[Category: Park-Snyder, S]]
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[[Category: Ng KK]]
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[[Category: Weis, W I]]
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[[Category: Park-Snyder S]]
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[[Category: Immune system]]
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[[Category: Weis WI]]
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[[Category: Protein-carbohydrate complex]]
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[[Category: Sugar binding protein]]
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Revision as of 09:07, 16 August 2023

Complex of MBP-C and GlcNAc-terminated core

PDB ID 1kzd

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