This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1l2d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:08, 16 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1l2d' size='340' side='right'caption='[[1l2d]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='1l2d' size='340' side='right'caption='[[1l2d]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1l2d]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_12980 Atcc 12980]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1L2D OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1L2D FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1l2d]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1L2D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1L2D FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=HPD:1-HYDROXY-PENTANE-3,4-DIOL-5-PHOSPHATE'>HPD</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HPD:1-HYDROXY-PENTANE-3,4-DIOL-5-PHOSPHATE'>HPD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1l1t|1l1t]], [[1l1z|1l1z]], [[1l2b|1l2b]], [[1l2c|1l2c]]</div></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1l2d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1l2d OCA], [https://pdbe.org/1l2d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1l2d RCSB], [https://www.ebi.ac.uk/pdbsum/1l2d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1l2d ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MutM ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1422 ATCC 12980])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1l2d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1l2d OCA], [http://pdbe.org/1l2d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1l2d RCSB], [http://www.ebi.ac.uk/pdbsum/1l2d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1l2d ProSAT]</span></td></tr>
+
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 36: Line 34:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 12980]]
+
[[Category: Geobacillus stearothermophilus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Fromme, J C]]
+
[[Category: Fromme JC]]
-
[[Category: Verdine, G L]]
+
[[Category: Verdine GL]]
-
[[Category: Dna glycosylase]]
+
-
[[Category: Dna repair]]
+
-
[[Category: Hydrolase-dna complex]]
+
-
[[Category: Zinc finger]]
+

Current revision

MutM (Fpg)-DNA Estranged Guanine Mismatch Recognition Complex

PDB ID 1l2d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools