1m3x

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[[Image:1m3x.gif|left|200px]]
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{{Structure
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|PDB= 1m3x |SIZE=350|CAPTION= <scene name='initialview01'>1m3x</scene>, resolution 2.55&Aring;
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|LIGAND= <scene name='pdbligand=BCL:BACTERIOCHLOROPHYLL+A'>BCL</scene>, <scene name='pdbligand=BPH:BACTERIOPHEOPHYTIN+A'>BPH</scene>, <scene name='pdbligand=CDL:CARDIOLIPIN'>CDL</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GGD:NONADEC-10-ENOIC+ACID+2-[3,4-DIHYDROXY-6-HYDROXYMETHYL-5-(3,4,5-TRIHYDROXY-6-HYDROXYMETHYL-TETRAHYDRO-PYRAN-2-YLOXY)-TETRAHYDRO-PYRAN-2-YLOXY]-1-OCTADEC-9-ENOYLOXYMETHYL-ETHYL+ESTER'>GGD</scene>, <scene name='pdbligand=PC1:1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE'>PC1</scene>, <scene name='pdbligand=SPO:SPHEROIDENE'>SPO</scene>, <scene name='pdbligand=U10:UBIQUINONE-10'>U10</scene>
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{{STRUCTURE_1m3x| PDB=1m3x | SCENE= }}
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1m3x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m3x OCA], [http://www.ebi.ac.uk/pdbsum/1m3x PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1m3x RCSB]</span>
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'''Photosynthetic Reaction Center From Rhodobacter Sphaeroides'''
'''Photosynthetic Reaction Center From Rhodobacter Sphaeroides'''
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[[Category: Brune, D.]]
[[Category: Brune, D.]]
[[Category: Camara-Artigas, A.]]
[[Category: Camara-Artigas, A.]]
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[[Category: alpha helix]]
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[[Category: Alpha helix]]
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[[Category: membrane protein]]
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[[Category: Membrane protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 00:35:51 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:10:53 2008''
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Revision as of 21:35, 2 May 2008

Template:STRUCTURE 1m3x

Photosynthetic Reaction Center From Rhodobacter Sphaeroides


Overview

The structure of the reaction center from Rhodobacter sphaeroides has been solved by using x-ray diffraction at a 2.55-A resolution limit. Three lipid molecules that lie on the surface of the protein are resolved in the electron density maps. In addition to a cardiolipin that has previously been reported [McAuley, K. E., Fyfe, P. K., Ridge, J. P., Isaacs, N. W., Cogdell, R. J. & Jones, M. R. (1999) Proc. Natl. Acad. Sci. USA 96, 14706-14711], two other major lipids of the cell membrane are found, a phosphatidylcholine and a glucosylgalactosyl diacylglycerol. The presence of these three lipids has been confirmed by laser mass spectroscopy. The lipids are located in the hydrophobic region of the protein surface and interact predominately with hydrophobic amino acids, in particular aromatic residues. Although the cardiolipin is over 15 A from the cofactors, the other two lipids are in close contact with the cofactors and may contribute to the difference in energetics for the two branches of cofactors that is primarily responsible for the asymmetry of electron transfer. The glycolipid is 3.5 A from the active bacteriochlorophyll monomer and shields this cofactor from the solvent in contrast to a much greater exposed surface evident for the inactive bacteriochlorophyll monomer. The phosphate atom of phosphatidylcholine is 6.5 A from the inactive bacteriopheophytin, and the associated electrostatic interactions may contribute to electron transfer rates involving this cofactor. Overall, the lipids span a distance of approximately 30 A, which is consistent with a bilayer-like arrangement suggesting the presence of an "inner shell" of lipids around membrane proteins that is critical for membrane function.

About this Structure

1M3X is a Protein complex structure of sequences from Rhodobacter sphaeroides. Full crystallographic information is available from OCA.

Reference

Interactions between lipids and bacterial reaction centers determined by protein crystallography., Camara-Artigas A, Brune D, Allen JP, Proc Natl Acad Sci U S A. 2002 Aug 20;99(17):11055-60. Epub 2002 Aug 7. PMID:12167672 Page seeded by OCA on Sat May 3 00:35:51 2008

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