1p5l
From Proteopedia
(Difference between revisions)
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==HP (2-20) Substitution PHE5 to SER modification in sds-d25 micelles== | ==HP (2-20) Substitution PHE5 to SER modification in sds-d25 micelles== | ||
| - | <StructureSection load='1p5l' size='340' side='right'caption='[[1p5l | + | <StructureSection load='1p5l' size='340' side='right'caption='[[1p5l]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1p5l]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P5L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1P5L FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[1p5l]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_J99 Helicobacter pylori J99]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P5L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1P5L FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1p5l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1p5l OCA], [https://pdbe.org/1p5l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1p5l RCSB], [https://www.ebi.ac.uk/pdbsum/1p5l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1p5l ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1p5l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1p5l OCA], [https://pdbe.org/1p5l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1p5l RCSB], [https://www.ebi.ac.uk/pdbsum/1p5l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1p5l ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/RL1_HELPY RL1_HELPY] Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (By similarity).[HAMAP-Rule:MF_01318] Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA (By similarity).[HAMAP-Rule:MF_01318] Peptides originating from the N-terminal end of L1 have antibacterial activity against bacteria such as E.coli and B.megaterium and modest antifungal activities. Has no effect on H.pylori itself. Peptides are not hemolytic against mammalian cells. These peptides may be released in the stomach during altruistic lysis to kill other fast growing bacteria.[HAMAP-Rule:MF_01318] | |
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Helicobacter pylori J99]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Harm | + | [[Category: Harm KS]] |
| - | [[Category: Kim | + | [[Category: Kim YM]] |
| - | [[Category: Lee | + | [[Category: Lee DG]] |
| - | [[Category: Lee | + | [[Category: Lee KH]] |
| - | [[Category: Park | + | [[Category: Park YK]] |
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Revision as of 10:29, 16 August 2023
HP (2-20) Substitution PHE5 to SER modification in sds-d25 micelles
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