This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


8q2m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "8q2m" [edit=sysop:move=sysop])
Current revision (05:56, 23 August 2023) (edit) (undo)
 
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 8q2m is ON HOLD
+
==18mer DNA mimic Foldamer with an Aliphatic linker in complex with Sac7d V26A/M29A protein==
-
 
+
<StructureSection load='8q2m' size='340' side='right'caption='[[8q2m]], [[Resolution|resolution]] 3.21&Aring;' scene=''>
-
Authors: Deepak, D., Corvaglia, V., Wu, J., Huc, I.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[8q2m]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfolobus_acidocaldarius Sulfolobus acidocaldarius] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8Q2M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8Q2M FirstGlance]. <br>
-
Description: 18mer DNA mimic Foldamer with an Aliphatic linker in complex with Sac7d V26A/M29A protein
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.21&#8491;</td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOA:GLYCOLIC+ACID'>GOA</scene>, <scene name='pdbligand=V4F:8-(aminomethyl)-4-(phosphonomethoxy)quinoline-2-carboxylic+acid'>V4F</scene>, <scene name='pdbligand=V53:8-azanyl-4-(phosphonomethoxy)quinoline-2-carboxylic+acid'>V53</scene>, <scene name='pdbligand=V5F:(2R)-2-(2-azanylphenoxy)propanoic+acid'>V5F</scene></td></tr>
-
[[Category: Wu, J]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8q2m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8q2m OCA], [https://pdbe.org/8q2m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8q2m RCSB], [https://www.ebi.ac.uk/pdbsum/8q2m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8q2m ProSAT]</span></td></tr>
-
[[Category: Corvaglia, V]]
+
</table>
-
[[Category: Huc, I]]
+
== Function ==
-
[[Category: Deepak, D]]
+
[https://www.uniprot.org/uniprot/DN7D_SULAC DN7D_SULAC] Can constrain negative DNA supercoils. May be involved in maintaining the integrity of the genome at high temperature.[UniProtKB:P61990]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Sulfolobus acidocaldarius]]
 +
[[Category: Synthetic construct]]
 +
[[Category: Corvaglia V]]
 +
[[Category: Deepak D]]
 +
[[Category: Huc I]]
 +
[[Category: Wu J]]

Current revision

18mer DNA mimic Foldamer with an Aliphatic linker in complex with Sac7d V26A/M29A protein

PDB ID 8q2m

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools