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1s3h

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Current revision (06:12, 23 August 2023) (edit) (undo)
 
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<StructureSection load='1s3h' size='340' side='right'caption='[[1s3h]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
<StructureSection load='1s3h' size='340' side='right'caption='[[1s3h]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1s3h]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"propionibacterium_shermanii"_van_niel_1928 "propionibacterium shermanii" van niel 1928]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S3H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1S3H FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1s3h]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Propionibacterium_freudenreichii_subsp._shermanii Propionibacterium freudenreichii subsp. shermanii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S3H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1S3H FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1rqb|1rqb]], [[1rqe|1rqe]], [[1rqh|1rqh]], [[1rr2|1rr2]], [[1s27|1s27]]</div></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">5S ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1752 "Propionibacterium shermanii" van Niel 1928])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Methylmalonyl-CoA_carboxytransferase Methylmalonyl-CoA carboxytransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.3.1 2.1.3.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1s3h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s3h OCA], [https://pdbe.org/1s3h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1s3h RCSB], [https://www.ebi.ac.uk/pdbsum/1s3h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1s3h ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1s3h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s3h OCA], [https://pdbe.org/1s3h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1s3h RCSB], [https://www.ebi.ac.uk/pdbsum/1s3h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1s3h ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/5S_PROFR 5S_PROFR]] The 5S subunit specifically catalyzes the transfer of the carboxyl group from biotin of the 1.3S subunit to pyruvate to form oxaloacetate and 1.3S biotin.
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[https://www.uniprot.org/uniprot/5S_PROFR 5S_PROFR] The 5S subunit specifically catalyzes the transfer of the carboxyl group from biotin of the 1.3S subunit to pyruvate to form oxaloacetate and 1.3S biotin.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Propionibacterium shermanii van niel 1928]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Methylmalonyl-CoA carboxytransferase]]
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[[Category: Propionibacterium freudenreichii subsp. shermanii]]
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[[Category: Antony, L]]
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[[Category: Antony L]]
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[[Category: Carey, P R]]
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[[Category: Carey PR]]
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[[Category: Hall, P R]]
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[[Category: Hall PR]]
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[[Category: Pusztai-Carey, M]]
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[[Category: Pusztai-Carey M]]
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[[Category: Yee, V C]]
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[[Category: Yee VC]]
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[[Category: Zheng, R]]
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[[Category: Zheng R]]
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[[Category: Carbamylated lysine]]
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[[Category: Cobalt]]
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[[Category: Tim-barrel]]
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[[Category: Transcarboxylase]]
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[[Category: Transferase]]
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Current revision

Propionibacterium shermanii transcarboxylase 5S subunit A59T

PDB ID 1s3h

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OCA

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