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1ylh

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Current revision (06:58, 23 August 2023) (edit) (undo)
 
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<StructureSection load='1ylh' size='340' side='right'caption='[[1ylh]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='1ylh' size='340' side='right'caption='[[1ylh]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1ylh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Actsc Actsc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YLH OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1YLH FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1ylh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Actinobacillus_succinogenes Actinobacillus succinogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YLH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YLH FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=DT3:(2S,3S)-2,3-DIHYDROXY-4-SULFANYLBUTANE-1-SULFONATE'>DT3</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PYR:PYRUVIC+ACID'>PYR</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1ygg|1ygg]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=DT3:(2S,3S)-2,3-DIHYDROXY-4-SULFANYLBUTANE-1-SULFONATE'>DT3</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PYR:PYRUVIC+ACID'>PYR</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PCKA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=67854 ACTSC])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ylh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ylh OCA], [https://pdbe.org/1ylh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ylh RCSB], [https://www.ebi.ac.uk/pdbsum/1ylh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ylh ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphoenolpyruvate_carboxykinase_(ATP) Phosphoenolpyruvate carboxykinase (ATP)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.49 4.1.1.49] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1ylh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ylh OCA], [http://pdbe.org/1ylh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ylh RCSB], [http://www.ebi.ac.uk/pdbsum/1ylh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ylh ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/Q6W6X5_ACTSC Q6W6X5_ACTSC]] Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA (By similarity).[HAMAP-Rule:MF_00453]
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[https://www.uniprot.org/uniprot/PCKA_ACTSZ PCKA_ACTSZ] Involved in gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Actsc]]
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[[Category: Actinobacillus succinogenes]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Delbaere, L T]]
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[[Category: Delbaere LT]]
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[[Category: Laivenieks, M]]
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[[Category: Laivenieks M]]
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[[Category: Leduc, Y A]]
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[[Category: Leduc YA]]
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[[Category: Prasad, L]]
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[[Category: Prasad L]]
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[[Category: Zeikus, J G]]
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[[Category: Zeikus JG]]
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[[Category: Bound sulfhydrl reducing agent]]
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[[Category: Disulphide bond]]
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[[Category: Lyase]]
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[[Category: Phosphoenolpyruvate carboxykinase]]
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Current revision

Crystal Structure of Phosphoenolpyruvate Carboxykinase from Actinobaccilus succinogenes in Complex with Manganese and Pyruvate

PDB ID 1ylh

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