2ak5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:25, 23 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2ak5' size='340' side='right'caption='[[2ak5]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
<StructureSection load='2ak5' size='340' side='right'caption='[[2ak5]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2ak5]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AK5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AK5 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2ak5]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AK5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AK5 FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ak5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ak5 OCA], [https://pdbe.org/2ak5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ak5 RCSB], [https://www.ebi.ac.uk/pdbsum/2ak5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ak5 ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ak5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ak5 OCA], [https://pdbe.org/2ak5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ak5 RCSB], [https://www.ebi.ac.uk/pdbsum/2ak5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ak5 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/ARHG7_RAT ARHG7_RAT]] Acts as a RAC1 guanine nucleotide exchange factor (GEF) and can induce membrane ruffling. Functions in cell migration, attachment and cell spreading. Promotes targeting of RAC1 to focal adhesions. May function as a positive regulator of apoptosis. Downstream of NMDA receptors and CaMKK-CaMK1 signaling cascade, promotes the formation of spines and synapses in hippocampal neurons (By similarity). [[https://www.uniprot.org/uniprot/CBLB_HUMAN CBLB_HUMAN]] E3 ubiquitin-protein ligase which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes, and transfers it to substrates, generally promoting their degradation by the proteasome. Negatively regulates TCR (T-cell receptor), BCR (B-cell receptor) and FCER1 (high affinity immunoglobulin epsilon receptor) signal transduction pathways. In naive T-cells, inhibits VAV1 activation upon TCR engagement and imposes a requirement for CD28 costimulation for proliferation and IL-2 production. Also acts by promoting PIK3R1/p85 ubiquitination, which impairs its recruitment to the TCR and subsequent activation. In activated T-cells, inhibits PLCG1 activation and calcium mobilization upon restimulation and promotes anergy. In B-cells, acts by ubiquitinating SYK and promoting its proteasomal degradation. May also be involved in EGFR ubiquitination and internalization.<ref>PMID:10022120</ref> <ref>PMID:10086340</ref> <ref>PMID:11087752</ref> <ref>PMID:11526404</ref>
+
[https://www.uniprot.org/uniprot/ARHG7_RAT ARHG7_RAT] Acts as a RAC1 guanine nucleotide exchange factor (GEF) and can induce membrane ruffling. Functions in cell migration, attachment and cell spreading. Promotes targeting of RAC1 to focal adhesions. May function as a positive regulator of apoptosis. Downstream of NMDA receptors and CaMKK-CaMK1 signaling cascade, promotes the formation of spines and synapses in hippocampal neurons (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 34: Line 35:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Buffalo rat]]
+
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Bravo, J]]
+
[[Category: Rattus norvegicus]]
-
[[Category: Cardenes, N]]
+
[[Category: Bravo J]]
-
[[Category: Deribe, Y L]]
+
[[Category: Cardenes N]]
-
[[Category: Dikic, I]]
+
[[Category: Deribe YL]]
-
[[Category: Groemping, Y]]
+
[[Category: Dikic I]]
-
[[Category: Hoeller, D]]
+
[[Category: Groemping Y]]
-
[[Category: Jozic, D]]
+
[[Category: Hoeller D]]
-
[[Category: Moncalian, G]]
+
[[Category: Jozic D]]
-
[[Category: Rittinger, K]]
+
[[Category: Moncalian G]]
-
[[Category: Adaptor protein]]
+
[[Category: Rittinger K]]
-
[[Category: Cbl]]
+
-
[[Category: Cin85]]
+
-
[[Category: Endocytosis]]
+
-
[[Category: Endocytosis-exocytosis complex]]
+
-
[[Category: Pix/cool]]
+
-
[[Category: Protein-protein interaction]]
+

Current revision

beta PIX-SH3 complexed with a Cbl-b peptide

PDB ID 2ak5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools