2fpm

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Current revision (09:31, 30 August 2023) (edit) (undo)
 
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<StructureSection load='2fpm' size='340' side='right'caption='[[2fpm]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='2fpm' size='340' side='right'caption='[[2fpm]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2fpm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_33273 Atcc 33273]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1z4d 1z4d]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FPM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FPM FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2fpm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanococcus_voltae Methanococcus voltae]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1z4d 1z4d]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FPM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FPM FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1t4g|1t4g]], [[1xu4|1xu4]], [[2fpk|2fpk]], [[2fpl|2fpl]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RADA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2188 ATCC 33273])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fpm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fpm OCA], [https://pdbe.org/2fpm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fpm RCSB], [https://www.ebi.ac.uk/pdbsum/2fpm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fpm ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fpm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fpm OCA], [https://pdbe.org/2fpm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fpm RCSB], [https://www.ebi.ac.uk/pdbsum/2fpm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fpm ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/RADA_METVO RADA_METVO]] Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules (By similarity).
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[https://www.uniprot.org/uniprot/RADA_METVO RADA_METVO] Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Atcc 33273]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: He, Y]]
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[[Category: Methanococcus voltae]]
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[[Category: Luo, Y]]
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[[Category: He Y]]
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[[Category: Moya, I A]]
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[[Category: Luo Y]]
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[[Category: Qian, X]]
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[[Category: Moya IA]]
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[[Category: Wu, Y]]
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[[Category: Qian X]]
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[[Category: Atpase]]
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[[Category: Wu Y]]
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[[Category: Co-factor]]
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[[Category: Potassium-dependence]]
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[[Category: Protein-atp complex]]
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[[Category: Rada-adp complex]]
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[[Category: Recombination]]
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Current revision

RadA recombinase in complex with AMP-PNP and high concentration of K+

PDB ID 2fpm

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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