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2i5m
From Proteopedia
(Difference between revisions)
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<StructureSection load='2i5m' size='340' side='right'caption='[[2i5m]], [[Resolution|resolution]] 2.30Å' scene=''> | <StructureSection load='2i5m' size='340' side='right'caption='[[2i5m]], [[Resolution|resolution]] 2.30Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2i5m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2i5m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I5M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I5M FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i5m OCA], [https://pdbe.org/2i5m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i5m RCSB], [https://www.ebi.ac.uk/pdbsum/2i5m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i5m ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i5m OCA], [https://pdbe.org/2i5m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i5m RCSB], [https://www.ebi.ac.uk/pdbsum/2i5m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i5m ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/CSPB_BACSU CSPB_BACSU] Binds to the pentamer sequences ATTGG and CCAAT with highest affinity in single-stranded DNA, and also to other sequences. Has greater affinity for ATTGG than CCAAT. Can act as transcriptional activator of cold shock genes by recognizing putative ATTGG-box elements present in promoter regions of genes induced under cold shock conditions. | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Bacillus subtilis]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Heinemann | + | [[Category: Heinemann U]] |
| - | [[Category: Max | + | [[Category: Max KEA]] |
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Current revision
Crystal structure of Bacillus subtilis cold shock protein CspB variant A46K S48R
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