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2rbm

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Current revision (11:53, 30 August 2023) (edit) (undo)
 
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== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2rbm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RBM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RBM FirstGlance]. <br>
<table><tr><td colspan='2'>[[2rbm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RBM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RBM FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nuc ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=THP:THYMIDINE-3,5-DIPHOSPHATE'>THP</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rbm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rbm OCA], [https://pdbe.org/2rbm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rbm RCSB], [https://www.ebi.ac.uk/pdbsum/2rbm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rbm ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rbm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rbm OCA], [https://pdbe.org/2rbm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rbm RCSB], [https://www.ebi.ac.uk/pdbsum/2rbm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rbm ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/NUC_STAAW NUC_STAAW]] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond (By similarity).
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[https://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Micrococcal nuclease]]
 
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
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[[Category: Garcia-Moreno, E B]]
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[[Category: Garcia-Moreno EB]]
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[[Category: Khangulov, V S]]
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[[Category: Khangulov VS]]
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[[Category: Schlessman, J L]]
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[[Category: Schlessman JL]]
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[[Category: Calcium]]
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[[Category: Endonuclease]]
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[[Category: Hydrolase]]
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[[Category: Hyperstable variant]]
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[[Category: Metal-binding]]
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[[Category: Pdtp]]
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[[Category: Secreted]]
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[[Category: Staphylococcal nuclease]]
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[[Category: Zymogen]]
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Current revision

Crystal structure of Staphylococcal nuclease variant Delta+PHS I72K at cryogenic temperature

PDB ID 2rbm

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