3dl0

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Current revision (12:48, 30 August 2023) (edit) (undo)
 
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<StructureSection load='3dl0' size='340' side='right'caption='[[3dl0]], [[Resolution|resolution]] 1.58&Aring;' scene=''>
<StructureSection load='3dl0' size='340' side='right'caption='[[3dl0]], [[Resolution|resolution]] 1.58&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3dl0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DL0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DL0 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3dl0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DL0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DL0 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AP5:BIS(ADENOSINE)-5-PENTAPHOSPHATE'>AP5</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.58&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3dkv|3dkv]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AP5:BIS(ADENOSINE)-5-PENTAPHOSPHATE'>AP5</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ADK ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Bacillus globigii" Migula 1900])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Adenylate_kinase Adenylate kinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.3 2.7.4.3] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dl0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dl0 OCA], [https://pdbe.org/3dl0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dl0 RCSB], [https://www.ebi.ac.uk/pdbsum/3dl0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dl0 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dl0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dl0 OCA], [https://pdbe.org/3dl0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dl0 RCSB], [https://www.ebi.ac.uk/pdbsum/3dl0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dl0 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/KAD_BACSU KAD_BACSU]] Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth.
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[https://www.uniprot.org/uniprot/KAD_BACSU KAD_BACSU] Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacillus globigii migula 1900]]
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[[Category: Bacillus subtilis]]
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[[Category: Adenylate kinase]]
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[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Bannen, R M]]
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[[Category: Bannen RM]]
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[[Category: Bianchetti, C M]]
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[[Category: Bianchetti CM]]
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[[Category: Bingman, C A]]
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[[Category: Bingman CA]]
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[[Category: McCoy, J G]]
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[[Category: McCoy JG]]
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[[Category: Atp-binding]]
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[[Category: Kinase]]
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[[Category: Metal-binding]]
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[[Category: Nucleotide biosynthesis]]
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[[Category: Nucleotide-binding]]
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[[Category: Phosphotransferase]]
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[[Category: Transferase]]
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[[Category: Zinc coordination]]
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Current revision

Crystal structure of adenylate kinase variant AKlse3

PDB ID 3dl0

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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