3eh3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:03, 30 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3eh3' size='340' side='right'caption='[[3eh3]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
<StructureSection load='3eh3' size='340' side='right'caption='[[3eh3]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3eh3]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EH3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EH3 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3eh3]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EH3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EH3 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU1:COPPER+(I)+ION'>CU1</scene>, <scene name='pdbligand=CUA:DINUCLEAR+COPPER+ION'>CUA</scene>, <scene name='pdbligand=HAS:HEME-AS'>HAS</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2qpd|2qpd]], [[2qpe|2qpe]], [[1xme|1xme]], [[3eh4|3eh4]], [[3eh5|3eh5]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU1:COPPER+(I)+ION'>CU1</scene>, <scene name='pdbligand=CUA:DINUCLEAR+COPPER+ION'>CUA</scene>, <scene name='pdbligand=HAS:HEME-AS'>HAS</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cbaA, TTHA1135 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8]), cbaB, ctaC, TTHA1134 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8]), cbaD, TTHA1133 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Cytochrome-c_oxidase Cytochrome-c oxidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.9.3.1 1.9.3.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3eh3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eh3 OCA], [https://pdbe.org/3eh3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3eh3 RCSB], [https://www.ebi.ac.uk/pdbsum/3eh3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3eh3 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3eh3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eh3 OCA], [https://pdbe.org/3eh3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3eh3 RCSB], [https://www.ebi.ac.uk/pdbsum/3eh3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3eh3 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/COX2_THET8 COX2_THET8]] Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
+
[https://www.uniprot.org/uniprot/COX1_THET8 COX1_THET8]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 38: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Cytochrome-c oxidase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Thet8]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Chen, Y]]
+
[[Category: Chen Y]]
-
[[Category: Doukov, T]]
+
[[Category: Doukov T]]
-
[[Category: Fee, J A]]
+
[[Category: Fee JA]]
-
[[Category: Liu, B]]
+
[[Category: Liu B]]
-
[[Category: Soltis, S M]]
+
[[Category: Soltis SM]]
-
[[Category: Stout, D]]
+
[[Category: Stout D]]
-
[[Category: Cell membrane]]
+
-
[[Category: Copper]]
+
-
[[Category: Cytochrome ba3 oxidase]]
+
-
[[Category: Electron transport]]
+
-
[[Category: Formylation]]
+
-
[[Category: Heme]]
+
-
[[Category: Hydrogen ion transport]]
+
-
[[Category: Integral membrane protein]]
+
-
[[Category: Ion transport]]
+
-
[[Category: Iron]]
+
-
[[Category: Membrane]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Respiratory chain]]
+
-
[[Category: Transmembrane]]
+
-
[[Category: Transport]]
+

Current revision

Structure of the reduced form of cytochrome ba3 oxidase from Thermus thermophilus

PDB ID 3eh3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools