5ic3

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Current revision (13:45, 30 August 2023) (edit) (undo)
 
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<StructureSection load='5ic3' size='340' side='right'caption='[[5ic3]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='5ic3' size='340' side='right'caption='[[5ic3]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5ic3]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IC3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5IC3 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5ic3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Alphapapillomavirus_7 Alphapapillomavirus 7] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IC3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5IC3 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PQR:4-[METHYL(NITROSO)AMINO]BENZENE-1,2-DIOL'>PQR</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4jor|4jor]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PQR:4-[METHYL(NITROSO)AMINO]BENZENE-1,2-DIOL'>PQR</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GOPC, CAL, FIG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ic3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ic3 OCA], [https://pdbe.org/5ic3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ic3 RCSB], [https://www.ebi.ac.uk/pdbsum/5ic3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ic3 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ic3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ic3 OCA], [http://pdbe.org/5ic3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ic3 RCSB], [http://www.ebi.ac.uk/pdbsum/5ic3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ic3 ProSAT]</span></td></tr>
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</table>
</table>
== Disease ==
== Disease ==
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[[http://www.uniprot.org/uniprot/GOPC_HUMAN GOPC_HUMAN]] Note=A chromosomal aberration involving GOPC is found in a glioblastoma multiforme sample. An intra-chromosomal deletion del(6)(q21q21) is responsible for the formation of GOPC-ROS1 chimeric protein which has a constitutive receptor tyrosine kinase activity.<ref>PMID:12661006</ref>
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[https://www.uniprot.org/uniprot/GOPC_HUMAN GOPC_HUMAN] Note=A chromosomal aberration involving GOPC is found in a glioblastoma multiforme sample. An intra-chromosomal deletion del(6)(q21q21) is responsible for the formation of GOPC-ROS1 chimeric protein which has a constitutive receptor tyrosine kinase activity.<ref>PMID:12661006</ref>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/GOPC_HUMAN GOPC_HUMAN]] Plays a role in intracellular protein trafficking and degradation. May regulate CFTR chloride currents and acid-induced ASIC3 currents by modulating cell surface expression of both channels. May also regulate the intracellular trafficking of the ADR1B receptor. May play a role in autophagy. Overexpression results in CFTR intracellular retention and degradation in the lysosomes.<ref>PMID:11707463</ref> <ref>PMID:14570915</ref> <ref>PMID:15358775</ref>
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[https://www.uniprot.org/uniprot/GOPC_HUMAN GOPC_HUMAN] Plays a role in intracellular protein trafficking and degradation. May regulate CFTR chloride currents and acid-induced ASIC3 currents by modulating cell surface expression of both channels. May also regulate the intracellular trafficking of the ADR1B receptor. May play a role in autophagy. Overexpression results in CFTR intracellular retention and degradation in the lysosomes.<ref>PMID:11707463</ref> <ref>PMID:14570915</ref> <ref>PMID:15358775</ref>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Alphapapillomavirus 7]]
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Madden, D R]]
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[[Category: Madden DR]]
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[[Category: Zhao, Y]]
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[[Category: Zhao Y]]
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[[Category: Cal pdz]]
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[[Category: Complex]]
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[[Category: Inhibitor]]
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[[Category: Peptide binding protein]]
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[[Category: Peptide binding protein-inhibitor complex]]
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Current revision

CAL PDZ domain with peptide and inhibitor

PDB ID 5ic3

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