This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Pilin 3D structures

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 4: Line 4:
{{#tree:id=OrganizedByTopic|openlevels=0|
{{#tree:id=OrganizedByTopic|openlevels=0|
-
*pilin
+
*Pilin
-
 
+
**[[1kb7]], [[1kb8]] – PaPIL KB7 – Pseudomonas aeruginosa – NMR<br />
-
**[[3fhu]] – StPrePIL type IV b residues 26-181 – ''Salmonella typhii''<BR />
+
**[[1nil]], [[1nim]] - PaPIL PAK – NMR<br />
-
**[[1q5f]] - StPrePIL type IV b residues 26-181 - NMR<BR />
+
-
**[[1kb7]], [[1kb8]] – PaPIL KB7 – ''Pseudomonas aeruginosa'' – NMR<BR />
+
-
**[[1nil]], [[1nim]] - PaPIL PAK – NMR<BR />
+
**[[5vxy]] - PaPIL PAK – Cryo EM<br />
**[[5vxy]] - PaPIL PAK – Cryo EM<br />
-
**[[1oqw]], [[1x6p]], [[1x6q]], [[1x6r]], [[1x6z]], [[1x6x]], [[1x6y]] - PaPIL PAK<BR />
+
**[[1oqw]], [[1x6p]], [[1x6q]], [[1x6r]], [[1x6z]], [[1x6x]], [[1x6y]] - PaPIL PAK<br />
-
**[[2py0]] - PaPIL PAK (mutant) <BR />
+
**[[2py0]] - PaPIL PAK (mutant) <br />
-
**[[1pan]], [[1pao]] - PaPIL PAO – NMR<BR />
+
**[[1pan]], [[1pao]] - PaPIL PAO – NMR<br />
-
**[[1hpw]], [[1qve]], [[1rg0]], [[6bbk]] – PaPIL type I residues 29-150<BR />
+
**[[1hpw]], [[1qve]], [[1rg0]], [[6bbk]] – PaPIL type I residues 29-150<br />
-
**[[1ay2]], [[2pil]], [[2hi2]], [[2hil]] – NgPIL type IV – ''Neisseria gonorrhoeae''<BR />
+
**[[2j6r]], [[3gea]], [[3ggh]], [[3hlr]], [[4we2]] – EcPIL K88 – Escherichia coli<br />
-
**[[5vxx]] - NgPIL type IV – Cryo EM<br />
+
**[[2jty]], [[5nkt]], [[6r74]] – EcPIL type IA<br />
-
**[[4v1j]], [[5v23]], [[5v0m]] - NmPIL type IV – ''Neisseria meningitis'' <br />
+
-
**[[2m3k]] - NmPIL type IV – NMR<br />
+
-
**[[5kua]] - NmPIL type IV – Cryo EM<br />
+
-
**[[5jw8]] – NmPIL type IV subunit pile<br />
+
-
**[[1dzo]] - PaPIL type IV globular domain (mutant) <BR />
+
-
**[[3jyz]], [[3jzz]] - PaPIL type IV globular domain<BR />
+
-
**[[2j6r]], [[3gea]], [[3ggh]], [[3hlr]], [[4we2]] – EcPIL K88 – ''Escherichia coli'' <BR />
+
-
**[[2jty]], [[5nkt]] – EcPIL type IA<BR />
+
**[[2m5g]] - EcPIL type IA – NMR<br />
**[[2m5g]] - EcPIL type IA – NMR<br />
**[[5oh0]], [[6c53]] - EcPIL type IA – Cryo EM<br />
**[[5oh0]], [[6c53]] - EcPIL type IA – Cryo EM<br />
-
**[[3s0t]] - EcPIL type IV<br />
 
-
**[[3gld]], [[3gle]] – PIL (mutant) – ''Streptococcus pyogenes''<BR />
 
**[[3f83]], [[3f84]], [[3f85]] – EcPIL CFAE/CFAB<br />
**[[3f83]], [[3f84]], [[3f85]] – EcPIL CFAE/CFAB<br />
**[[3vor]] - EcPIL CFA/III<br />
**[[3vor]] - EcPIL CFA/III<br />
Line 38: Line 25:
**[[4y2o]] - EcPIL CFA/I subunit A+B<br />
**[[4y2o]] - EcPIL CFA/I subunit A+B<br />
**[[2n7h]] - EcPIL type I subunit A<br />
**[[2n7h]] - EcPIL type I subunit A<br />
-
**[[4bhr]] - TtPIL type IV – ''Thermus thermophilus''<br />
+
**[[6ixy]] - PIL – Clostridium perfringens<br />
 +
**[[3rpk]], [[4s3l]] - majPIL type II – Streptococcus pneumoniae<br />
 +
**[[3sok]] - PIL – Dichelobacter nodosus<br />
 +
**[[5f44]], [[5hdl]], [[5yxo]], [[6jbv]], [[6jch]], [[6jk7]] - LrPIL – Lactobacillus rhamnosus<br />
 +
**[[5hts]], [[5j4m]], [[5z24]] - LrPIL (mutant) <br />
 +
**[[5fie]] - LrPIL SpaA N-terminal <br />
 +
**[[5faa]], [[5fgr]], [[5fgs]] - LrPIL SpaA C-terminal <br />
 +
**[[5hbb]] - LrPIL SpaA C-terminal (mutant) <br />
 +
**[[5z0z]] - LrPIL SpaD (mutant) <br />
 +
**[[5lp9]] - PIL – Shigella flexneri<br />
 +
**[[6w8u]] - PIL – Pyrobaculum arsenaticum – Cryo EM<br />
 +
**[[7ueg]], [[8dft]] - PIL – Pyrobaculum calidifontis – Cryo EM<br />
 +
**[[6w8x]] - PIL – Saccharolobus solfataricus – Cryo EM<br />
 +
**[[7jsv]] - PIL – Klebsiella pneumoniae – Cryo EM<br />
 +
**[[6vk9]] - GsPILA – Geobacter sulfurreducens – Cryo EM<br />
 +
**[[6olj]] - PILB – Geobacter metallirreducens – Cryo EM<br />
 +
**[[6kmf]] – PIL type V – Porphyromonas gingivalis – Cryo EM<br />
 +
**[[8sqx]] - CdPIL SpaB - NMR<br />
 +
**[[7woi]] – PIL Spa2 – Corynebacterium glutamicum<br />
 +
**[[2co3]] – SePIL SafA – Salmonella enterica<br />
 +
**[[8dfu]] – PIL – Aeropyrum pernix – Cryo EM<br />
 +
 
 +
*Pilin type IV
 +
**[[3fhu]]  – StPrePIL type IV b residues 26-181 – Salmonella typhii<br />
 +
**[[1q5f]] - StPrePIL type IV b residues 26-181 – NMR<br />
 +
**[[4ipu]], [[4ipv]], [[4noa]] – PaminPIL FimU<br />
 +
**[[1ay2]], [[2pil]], [[2hi2]], [[2hil]] – NgPIL type IV – Neisseria gonorrhoeae<br />
 +
**[[2nba]] - minPIL ComP – Neisseri subflava<br />
 +
**[[5vxx]] - NgPIL type IV – Cryo EM<br />
 +
**[[2opd]], [[2ope]], [[4v1j]], [[5v23]], [[5v0m]] - NmminPIL type IV – Neisseria meningitis <br />
 +
**[[2m3k]] - NmPIL type IV – NMR<br />
 +
**[[5kua]] - NmPIL type IV – Cryo EM<br />
 +
**[[5jw8]] – NmPIL type IV subunit PilE<br />
 +
**[[1dzo]] - PaPIL type IV globular domain (mutant) <br />
 +
**[[3jyz]], [[3jzz]] - PaPIL type IV globular domain<br />
 +
**[[3s0t]] - EcPIL type IV<br />
 +
**[[6bbt]], [[6bbw]], [[6n0a]] – SpmajPIL – Streptococcus pyogenes<br />
 +
**[[3gld]], [[3gle]] – SpmajPIL (mutant)
 +
**[[3klq]], [[5ttd]] - SpminPIL <br />
 +
**[[3b2m]], [[3pf2]], [[3pg2]] - SamajPIL C-terminal – Streptococcus agalatiae<br />
 +
**[[3tvy]] - SamajPIL N3 domain 212-584<br />
 +
**[[3txa]] - SamajPIL N2+N3 domain 48-729<br />
 +
**[[3phs]] - SaminPIL <br />
 +
**[[4bhr]], [[5g24]], [[5g25]] - TtPIL type IV – Thermus thermophilus<br />
**[[6xxd]], [[6xxe]] - TtPIL type IV – Cryo EM<br />
**[[6xxd]], [[6xxe]] - TtPIL type IV – Cryo EM<br />
-
**[[4ixj]], [[6tms]] - PIL type IV – ''Clostridium difficile''<br />
+
**[[4ixj]], [[6t8s]] - majPIL type IV – Clostridium difficile<br />
-
**[[6ixy]] - PIL ''Clostridium perfringens''<br />
+
**[[6i2o]] – SsminPIL1 – Streprococcus sanguinis - NMR<br />
-
**[[3sok]] - PIL – ''Dichelobacter nodosus''<br />
+
**[[7b7p]], [[7o5y]], [[7oa7]], [[7oa8]] – SsminPIL1<br />
-
**[[6jbv]], [[6jch]], [[6jk7]] - LrPIL ''Lactobacillus rhamnosus''<br />
+
**[[7ba2]] – SsminPIL1 (mutant)<br />
-
**[[4s3l]] - PIL type II ''Streptococcus pneumoniae''<br />
+
**[[2m7g]] - GsmajPILA NMR<br />
-
**[[5z24]] - PIL (mutant) ''Lactobacillus rhamnosus''<br />
+
**[[3hr6]], [[4hss]] - CdmajPIL Corynebacterium diphtheriae<br />
-
**[[5lp9]] - PIL ''Shigella flexneri''<br />
+
**[[4hsq]] - CdmajPIL D2+D3 domains<br />
-
**[[6i2o]] – SsPIL1 – ''Streprococcus sanguinis'' - NMR<br />
+
**[[1oqv]], [[7w63]] - VcminPIL Vibrio cholerae<br />
-
**[[7b7p]] – SsPIL1<br />
+
**[[6mic]] - VcminPIL TcpB C-terminal<br />
-
**[[7ba2]] – SsPIL1 (mutant)<br />
+
**[[7qyi]] - minPIL FimT Legionella pneumophila - NMR<br />
-
**[[6w8u]] - PIL – ''Pyrobaculum arsenaticum'' Cryo EM<br />
+
**[[8tj2]] PIL type IV Myxococcus xanthus – Cryo EM<br />
-
**[[6w8x]] - PIL – ''Saccharolobus solfataricus'' – Cryo EM<br />
+
**[[3kpt]], [[3rkp]] - majPIL BcpA Bacillus cereus <br />
-
**[[7jsv]] - PIL ''Klebsiella pneumoniae'' – Cryo EM<br />
+
**[[3soj]] – PIL type IV Francisella tularensis<br />
-
**[[6vk9]] - PILA ''Geobacter sulfurreducens'' Cryo EM<br />
+
**[[8gi2]] – PIL type IV Natrinema<br />
-
**[[6olj]] - PILB ''Geobacter metallirreducens'' Cryo EM<br />
+
**[[4xa2]] - majPIL Acinetobacter baumannii <br />
-
**[[6kmf]] – PIL type V – ''Porphyromonas gingivalis'' – Cryo EM<br />
+
*Pilin binary complex
*Pilin binary complex
-
**[[3fhv]] - StPrePIL type IV b residues 26-181 + CFTR peptide<BR />
+
**[[3fhv]] - StPrePIL  type IV b residues 26-181 + CFTR peptide<br />
-
**[[3gew]] - EcPIL K88 + chaperone protein FAEE<BR />
+
**[[2co6]], [[2co7]] – StPIL SafA + SafB chaperone<br />
 +
**[[2co1]], [[2co2]] – StPIL SafA + SafA peptide<br />
 +
**[[3gew]] - EcPIL K88 + chaperone protein FAEE<br />
**[[4wei]] - EcPIL K88 + lactose<br />
**[[4wei]] - EcPIL K88 + lactose<br />
**[[4weu]], [[4wem]], [[4wen]] - EcPIL K88 + llama single domain antibody<br />
**[[4weu]], [[4wem]], [[4wen]] - EcPIL K88 + llama single domain antibody<br />
-
**[[2xg4]], [[2xg5]], [[2j2z]] - EcPIL PAP + chaperone protein PAPD<BR />
+
**[[2xg4]], [[2xg5]], [[2j2z]] - EcPIL PAP + chaperone protein PAPD<br />
**[[2w07]], [[2uy6]], [[2uy7]] – EcPIL PAPF (mutant) + chaperone protein PAPD<br />
**[[2w07]], [[2uy6]], [[2uy7]] – EcPIL PAPF (mutant) + chaperone protein PAPD<br />
**[[3sqb]], [[4dwh]] - EcPIL type 1A + chaperone protein FIMC<br />
**[[3sqb]], [[4dwh]] - EcPIL type 1A + chaperone protein FIMC<br />
-
}}
+
**[[7w65]] - VcminPIL TcpB + TcpF<br />
 +
**[[2cnz]], [[2co4]] – SePIL SafA + SafA peptide <br />
 +
**[[7w64]] - VcminPIL TcpB + TcpF peptide<br />
 +
**[[5ypz]] - EcminPIL CofB + CofJ peptide<br />
 +
 
 +
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 09:13, 31 August 2023

3D Structures of pilin

Updated on 31-August-2023

 

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

Personal tools