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3fsj

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Current revision (06:51, 6 September 2023) (edit) (undo)
 
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<StructureSection load='3fsj' size='340' side='right'caption='[[3fsj]], [[Resolution|resolution]] 1.37&Aring;' scene=''>
<StructureSection load='3fsj' size='340' side='right'caption='[[3fsj]], [[Resolution|resolution]] 1.37&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3fsj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_fluorescens_putidus"_flugge_1886 "bacillus fluorescens putidus" flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FSJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FSJ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3fsj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FSJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FSJ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=D7K:3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-{(S)-HYDROXY[(R)-HYDROXY(METHOXY)PHOSPHORYL]PHENYLMETHYL}-5-(2-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM'>D7K</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.37&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3d7k|3d7k]], [[3f6b|3f6b]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=D7K:3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-{(S)-HYDROXY[(R)-HYDROXY(METHOXY)PHOSPHORYL]PHENYLMETHYL}-5-(2-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM'>D7K</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mdlC ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=303 "Bacillus fluorescens putidus" Flugge 1886])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Benzoylformate_decarboxylase Benzoylformate decarboxylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.7 4.1.1.7] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fsj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fsj OCA], [https://pdbe.org/3fsj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fsj RCSB], [https://www.ebi.ac.uk/pdbsum/3fsj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fsj ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fsj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fsj OCA], [https://pdbe.org/3fsj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fsj RCSB], [https://www.ebi.ac.uk/pdbsum/3fsj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fsj ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/MDLC_PSEPU MDLC_PSEPU]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacillus fluorescens putidus flugge 1886]]
 
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[[Category: Benzoylformate decarboxylase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Brandt, G S]]
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[[Category: Pseudomonas putida]]
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[[Category: Jordan, F]]
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[[Category: Brandt GS]]
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[[Category: Kenyon, G L]]
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[[Category: Jordan F]]
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[[Category: McLeish, M J]]
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[[Category: Kenyon GL]]
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[[Category: Petsko, G A]]
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[[Category: McLeish MJ]]
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[[Category: Ringe, D]]
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[[Category: Petsko GA]]
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[[Category: Aromatic hydrocarbons catabolism]]
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[[Category: Ringe D]]
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[[Category: Calcium]]
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[[Category: Decarboxylase]]
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[[Category: Lyase]]
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[[Category: Magnesium]]
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[[Category: Mandelate pathway]]
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[[Category: Metal binding]]
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[[Category: Metal-binding]]
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[[Category: Thiamin adduct]]
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[[Category: Thiamine pyrophosphate]]
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Current revision

Crystal structure of benzoylformate decarboxylase in complex with the inhibitor MBP

PDB ID 3fsj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

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