3fw8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:53, 6 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3fw8' size='340' side='right'caption='[[3fw8]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='3fw8' size='340' side='right'caption='[[3fw8]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3fw8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/California_poppy California poppy]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FW8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FW8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3fw8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Eschscholzia_californica Eschscholzia californica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FW8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FW8 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3d2d|3d2d]], [[3d2h|3d2h]], [[3d2j|3d2j]], [[3fw7|3fw7]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BBE1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3467 California poppy])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Reticuline_oxidase Reticuline oxidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.21.3.3 1.21.3.3] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fw8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fw8 OCA], [https://pdbe.org/3fw8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fw8 RCSB], [https://www.ebi.ac.uk/pdbsum/3fw8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fw8 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fw8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fw8 OCA], [https://pdbe.org/3fw8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fw8 RCSB], [https://www.ebi.ac.uk/pdbsum/3fw8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fw8 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/RETO_ESCCA RETO_ESCCA]] Essential to the formation of benzophenanthridine alkaloids in the response of plants to pathogenic attack. Catalyzes the stereospecific conversion of the N-methyl moiety of (S)-reticuline into the berberine bridge carbon of (S)-scoulerine.
+
[https://www.uniprot.org/uniprot/RETO_ESCCA RETO_ESCCA] Essential to the formation of benzophenanthridine alkaloids in the response of plants to pathogenic attack. Catalyzes the stereospecific conversion of the N-methyl moiety of (S)-reticuline into the berberine bridge carbon of (S)-scoulerine.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 27: Line 25:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: California poppy]]
+
[[Category: Eschscholzia californica]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Reticuline oxidase]]
+
[[Category: Gruber K]]
-
[[Category: Gruber, K]]
+
[[Category: Macheroux P]]
-
[[Category: Macheroux, P]]
+
[[Category: Winkler A]]
-
[[Category: Winkler, A]]
+
-
[[Category: Alakloid biosynthesis]]
+
-
[[Category: Alkaloid metabolism]]
+
-
[[Category: Bi-covalent flavinylation]]
+
-
[[Category: Cytoplasmic vesicle]]
+
-
[[Category: Fad]]
+
-
[[Category: Flavoprotein]]
+
-
[[Category: Glycoprotein]]
+
-
[[Category: N-glycosylation]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Structure of berberine bridge enzyme, C166A variant

PDB ID 3fw8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools