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| <StructureSection load='3gdg' size='340' side='right'caption='[[3gdg]], [[Resolution|resolution]] 2.30Å' scene=''> | | <StructureSection load='3gdg' size='340' side='right'caption='[[3gdg]], [[Resolution|resolution]] 2.30Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[3gdg]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Byssus_herbarum Byssus herbarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GDG OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3GDG FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[3gdg]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Cladosporium_herbarum Cladosporium herbarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GDG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GDG FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3gdf|3gdf]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Mannitol_2-dehydrogenase_(NADP(+)) Mannitol 2-dehydrogenase (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.138 1.1.1.138] </span></td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gdg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gdg OCA], [https://pdbe.org/3gdg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gdg RCSB], [https://www.ebi.ac.uk/pdbsum/3gdg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gdg ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3gdg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gdg OCA], [http://pdbe.org/3gdg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gdg RCSB], [http://www.ebi.ac.uk/pdbsum/3gdg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gdg ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/MTDH_DAVTA MTDH_DAVTA] |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
| [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Byssus herbarum]] | + | [[Category: Cladosporium herbarum]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Brandstetter, H]] | + | [[Category: Brandstetter H]] |
- | [[Category: Breitenbach, M]] | + | [[Category: Breitenbach M]] |
- | [[Category: Denk, U]] | + | [[Category: Denk U]] |
- | [[Category: Goettig, P]] | + | [[Category: Goettig P]] |
- | [[Category: Magler, I]] | + | [[Category: Magler I]] |
- | [[Category: Nuess, D]] | + | [[Category: Nuess D]] |
- | [[Category: Schneider, P B]] | + | [[Category: Schneider PB]] |
- | [[Category: Simon-Nobbe, B]] | + | [[Category: Simon-Nobbe B]] |
- | [[Category: Allergen]]
| + | |
- | [[Category: Beta-alpha-beta motif]]
| + | |
- | [[Category: Nadp]]
| + | |
- | [[Category: Open twisted sheet]]
| + | |
- | [[Category: Oxidoreductase]]
| + | |
- | [[Category: Rossmann fold]]
| + | |
| Structural highlights
Function
MTDH_DAVTA
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
The ascomycete Cladosporium herbarum is a prominent fungal inducer of Type I allergy. The only major allergen identified so far is Cla h 8, a NADP-dependent mannitol dehydrogenase (MtDH). MtDH, a cytoplasmic protein of 28.5kDa, belongs to the Short chain Dehydrogenases/Reductases (SDR), acting as a NADP-dependent oxidoreductase. In this study, we found that C. herbarum MtDH can exist as monomers, dimers and tetramers in solution and, correspondingly, forms tetramers and higher oligomers in two crystal structures. Additionally, we identified a unique adaptive binding site for the metal ions Na(+) and Zn(2+) that were distinguished by an anomalous dispersion experiment. A Translation-Libration-Screw analysis confirmed the stabilising effect of Zn(2+) for the tetrameric assembly. Moreover, the zinc containing structure explains the mode of MtDH multimerisation by metal bridging of the tetramers. The formation of oligomers and higher multimers of MtDH provides a missing link to its allergenic properties. Based on the well defined active site region and a comparative analysis with related structures, we can also clarify the atypical enzymatic properties of MtDH by two alternative binding modes of the substrate to the active site.
Crystal structure of the NADP-dependent mannitol dehydrogenase from Cladosporium herbarum: Implications for oligomerisation and catalysis.,Nuss D, Goettig P, Magler I, Denk U, Breitenbach M, Schneider PB, Brandstetter H, Simon-Nobbe B Biochimie. 2010 Aug;92(8):985-93. Epub 2010 Apr 24. PMID:20420880[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Nuss D, Goettig P, Magler I, Denk U, Breitenbach M, Schneider PB, Brandstetter H, Simon-Nobbe B. Crystal structure of the NADP-dependent mannitol dehydrogenase from Cladosporium herbarum: Implications for oligomerisation and catalysis. Biochimie. 2010 Aug;92(8):985-93. Epub 2010 Apr 24. PMID:20420880 doi:10.1016/j.biochi.2010.04.012
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