3glx

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Current revision (07:07, 6 September 2023) (edit) (undo)
 
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<StructureSection load='3glx' size='340' side='right'caption='[[3glx]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
<StructureSection load='3glx' size='340' side='right'caption='[[3glx]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3glx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_diphtheriae"_kruse_in_flugge_1886 "bacillus diphtheriae" kruse in flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GLX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GLX FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3glx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_diphtheriae Corynebacterium diphtheriae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GLX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GLX FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2qqa|2qqa]], [[2qqb|2qqb]], [[2qq9|2qq9]], [[1ddn|1ddn]], [[1p92|1p92]], [[1xcv|1xcv]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DIP1414, dtxR ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1717 "Bacillus diphtheriae" Kruse in Flugge 1886])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3glx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3glx OCA], [https://pdbe.org/3glx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3glx RCSB], [https://www.ebi.ac.uk/pdbsum/3glx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3glx ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3glx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3glx OCA], [https://pdbe.org/3glx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3glx RCSB], [https://www.ebi.ac.uk/pdbsum/3glx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3glx ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/DTXR_CORDI DTXR_CORDI]] Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression. Represses ripA under iron excess.
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[https://www.uniprot.org/uniprot/DTXR_CORDI DTXR_CORDI] Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression. Represses ripA under iron excess.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacillus diphtheriae kruse in flugge 1886]]
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[[Category: Corynebacterium diphtheriae]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Aquino, J A.D]]
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[[Category: D'Aquino JA]]
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[[Category: Aquino, K E.D]]
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[[Category: D'Aquino KE]]
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[[Category: Denninger, A]]
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[[Category: Denninger A]]
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[[Category: Moulin, A]]
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[[Category: Moulin A]]
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[[Category: Ringe, D]]
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[[Category: Ringe D]]
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[[Category: Activation]]
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[[Category: Cytoplasm]]
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[[Category: Dna-binding]]
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[[Category: Dtxr]]
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[[Category: Ferrous iron]]
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[[Category: Helix-turn-helix]]
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[[Category: Iron]]
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[[Category: Metal ion]]
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[[Category: Regulator]]
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[[Category: Repressor]]
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[[Category: Transcription]]
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[[Category: Transcription regulation]]
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[[Category: Transcriptional regulation]]
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[[Category: Transcriptional regulator]]
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Current revision

Crystal Structure Analysis of the DtxR(E175K) complexed with Ni(II)

PDB ID 3glx

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