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3jwd

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Current revision (08:04, 6 September 2023) (edit) (undo)
 
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==Structure of HIV-1 gp120 with gp41-Interactive Region: Layered Architecture and Basis of Conformational Mobility==
==Structure of HIV-1 gp120 with gp41-Interactive Region: Layered Architecture and Basis of Conformational Mobility==
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<StructureSection load='3jwd' size='340' side='right' caption='[[3jwd]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
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<StructureSection load='3jwd' size='340' side='right'caption='[[3jwd]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3jwd]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/9hiv1 9hiv1] and [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JWD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3JWD FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3jwd]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JWD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JWD FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.61&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=YCM:S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE'>YCM</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=YCM:S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE'>YCM</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3jwo|3jwo]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jwd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jwd OCA], [https://pdbe.org/3jwd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jwd RCSB], [https://www.ebi.ac.uk/pdbsum/3jwd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jwd ProSAT]</span></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CD4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jwd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jwd OCA], [http://pdbe.org/3jwd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3jwd RCSB], [http://www.ebi.ac.uk/pdbsum/3jwd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3jwd ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/CD4_HUMAN CD4_HUMAN]] Accessory protein for MHC class-II antigen/T-cell receptor interaction. May regulate T-cell activation. Induces the aggregation of lipid rafts.
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[https://www.uniprot.org/uniprot/CD4_HUMAN CD4_HUMAN] Accessory protein for MHC class-II antigen/T-cell receptor interaction. May regulate T-cell activation. Induces the aggregation of lipid rafts.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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==See Also==
==See Also==
*[[Antibody 3D structures|Antibody 3D structures]]
*[[Antibody 3D structures|Antibody 3D structures]]
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*[[CD4|CD4]]
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*[[CD4 3D structures|CD4 3D structures]]
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*[[Gp120|Gp120]]
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*[[Gp120 3D structures|Gp120 3D structures]]
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*[[3D structures of human antibody|3D structures of human antibody]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
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[[Category: Ban, Y A]]
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[[Category: Human immunodeficiency virus 1]]
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[[Category: Chen, L]]
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[[Category: Large Structures]]
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[[Category: Huang, C C]]
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[[Category: Ban YA]]
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[[Category: Kong, L]]
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[[Category: Chen L]]
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[[Category: Kwon, Y D]]
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[[Category: Huang CC]]
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[[Category: Kwong, P D]]
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[[Category: Kong L]]
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[[Category: Majeed, S]]
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[[Category: Kwon YD]]
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[[Category: Pancera, M]]
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[[Category: Kwong PD]]
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[[Category: Robinson, J E]]
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[[Category: Majeed S]]
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[[Category: Schief, W R]]
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[[Category: Pancera M]]
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[[Category: Sodroski, J]]
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[[Category: Robinson JE]]
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[[Category: Stuckey, J]]
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[[Category: Schief WR]]
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[[Category: Wyatt, R]]
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[[Category: Sodroski J]]
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[[Category: Zhou, T]]
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[[Category: Stuckey J]]
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[[Category: Cell membrane]]
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[[Category: Wyatt R]]
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[[Category: Disulfide bond]]
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[[Category: Zhou T]]
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[[Category: Glycoprotein]]
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[[Category: Hiv-1 viral spike]]
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[[Category: Host-virus interaction]]
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[[Category: Immune response]]
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[[Category: Molecular motion]]
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[[Category: Protein architecture]]
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[[Category: Receptor-triggered entry]]
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[[Category: Type 1 fusion protein]]
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[[Category: Viral protein]]
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Current revision

Structure of HIV-1 gp120 with gp41-Interactive Region: Layered Architecture and Basis of Conformational Mobility

PDB ID 3jwd

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