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3k3g

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Current revision (08:08, 6 September 2023) (edit) (undo)
 
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==Crystal Structure of the Urea Transporter from Desulfovibrio Vulgaris Bound to 1,3-dimethylurea==
==Crystal Structure of the Urea Transporter from Desulfovibrio Vulgaris Bound to 1,3-dimethylurea==
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<StructureSection load='3k3g' size='340' side='right' caption='[[3k3g]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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<StructureSection load='3k3g' size='340' side='right'caption='[[3k3g]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3k3g]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desvh Desvh]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K3G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K3G FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3k3g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._Hildenborough Desulfovibrio vulgaris str. Hildenborough]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K3G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K3G FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AU:GOLD+ION'>AU</scene>, <scene name='pdbligand=MMU:1,3-DIMETHYLUREA'>MMU</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3k3f|3k3f]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AU:GOLD+ION'>AU</scene>, <scene name='pdbligand=MMU:1,3-DIMETHYLUREA'>MMU</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DVU_1160 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=882 DESVH])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k3g OCA], [https://pdbe.org/3k3g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k3g RCSB], [https://www.ebi.ac.uk/pdbsum/3k3g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k3g ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k3g OCA], [http://pdbe.org/3k3g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3k3g RCSB], [http://www.ebi.ac.uk/pdbsum/3k3g PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3k3g ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/UT_DESVH UT_DESVH]] Urea channel that facilitates transmembrane urea transport down a concentration gradient.<ref>PMID:19865084</ref>
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[https://www.uniprot.org/uniprot/UT_DESVH UT_DESVH] Urea channel that facilitates transmembrane urea transport down a concentration gradient.<ref>PMID:19865084</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k3/3k3g_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k3/3k3g_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
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</div>
</div>
<div class="pdbe-citations 3k3g" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3k3g" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Urea transporter|Urea transporter]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Desvh]]
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[[Category: Desulfovibrio vulgaris str. Hildenborough]]
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[[Category: Levin, E J]]
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[[Category: Large Structures]]
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[[Category: NYCOMPS, New York Consortium on Membrane Protein Structure]]
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[[Category: Levin EJ]]
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[[Category: Zhou, M]]
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[[Category: Zhou M]]
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[[Category: Channel]]
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[[Category: Membrane protein]]
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[[Category: New york consortium on membrane protein structure]]
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[[Category: Nycomp]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Structural genomic]]
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[[Category: Transport protein]]
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[[Category: Transporter]]
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[[Category: Urea transport]]
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Current revision

Crystal Structure of the Urea Transporter from Desulfovibrio Vulgaris Bound to 1,3-dimethylurea

PDB ID 3k3g

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