3k40

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Current revision (08:08, 6 September 2023) (edit) (undo)
 
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==Crystal structure of Drosophila 3,4-dihydroxyphenylalanine decarboxylase==
==Crystal structure of Drosophila 3,4-dihydroxyphenylalanine decarboxylase==
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<StructureSection load='3k40' size='340' side='right' caption='[[3k40]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
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<StructureSection load='3k40' size='340' side='right'caption='[[3k40]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3k40]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Drome Drome]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K40 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K40 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3k40]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K40 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K40 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CG10697, Ddc ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7227 DROME])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k40 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k40 OCA], [https://pdbe.org/3k40 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k40 RCSB], [https://www.ebi.ac.uk/pdbsum/3k40 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k40 ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aromatic-L-amino-acid_decarboxylase Aromatic-L-amino-acid decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.28 4.1.1.28] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k40 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k40 OCA], [http://pdbe.org/3k40 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3k40 RCSB], [http://www.ebi.ac.uk/pdbsum/3k40 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3k40 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/DDC_DROME DDC_DROME]] Catalyzes the decarboxylation of L-3,4-dihydroxyphenylalanine (DOPA) to dopamine, L-5-hydroxytryptophan to serotonin and L-tryptophan to tryptamine. Variation in the synthesis of bioamines may be a factor contributing to natural variation in life span.<ref>PMID:12881721</ref>
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[https://www.uniprot.org/uniprot/DDC_DROME DDC_DROME] Catalyzes the decarboxylation of L-3,4-dihydroxyphenylalanine (DOPA) to dopamine, L-5-hydroxytryptophan to serotonin and L-tryptophan to tryptamine. Variation in the synthesis of bioamines may be a factor contributing to natural variation in life span.<ref>PMID:12881721</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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==See Also==
==See Also==
*[[DOPA decarboxylase|DOPA decarboxylase]]
*[[DOPA decarboxylase|DOPA decarboxylase]]
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*[[User:Brian Hernandez/DOPA Decarboxylase|User:Brian Hernandez/DOPA Decarboxylase]]
 
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Aromatic-L-amino-acid decarboxylase]]
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[[Category: Drosophila melanogaster]]
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[[Category: Drome]]
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[[Category: Large Structures]]
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[[Category: Christensen, B M]]
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[[Category: Christensen BM]]
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[[Category: Ding, H]]
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[[Category: Ding H]]
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[[Category: Han, Q]]
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[[Category: Han Q]]
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[[Category: Li, J]]
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[[Category: Li J]]
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[[Category: Robinson, H]]
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[[Category: Robinson H]]
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[[Category: Alpha beta protein]]
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[[Category: Alternative splicing]]
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[[Category: Catecholamine biosynthesis]]
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[[Category: Cg10697-pb isoform b]]
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[[Category: Decarboxylase]]
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[[Category: Lyase]]
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[[Category: Plp dependent protein]]
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[[Category: Polymorphism]]
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[[Category: Pyridoxal phosphate]]
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Current revision

Crystal structure of Drosophila 3,4-dihydroxyphenylalanine decarboxylase

PDB ID 3k40

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