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3k9s

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Current revision (08:12, 6 September 2023) (edit) (undo)
 
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==Crystal structure of the peroxide-bound manganese superoxide dismutase.==
==Crystal structure of the peroxide-bound manganese superoxide dismutase.==
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<StructureSection load='3k9s' size='340' side='right' caption='[[3k9s]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
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<StructureSection load='3k9s' size='340' side='right'caption='[[3k9s]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3k9s]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K9S OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K9S FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3k9s]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K9S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K9S FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PEO:HYDROGEN+PEROXIDE'>PEO</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">b3908, JW3879, sodA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PEO:HYDROGEN+PEROXIDE'>PEO</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k9s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k9s OCA], [https://pdbe.org/3k9s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k9s RCSB], [https://www.ebi.ac.uk/pdbsum/3k9s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k9s ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k9s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k9s OCA], [http://pdbe.org/3k9s PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3k9s RCSB], [http://www.ebi.ac.uk/pdbsum/3k9s PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3k9s ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/SODM_ECOLI SODM_ECOLI]] Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
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[https://www.uniprot.org/uniprot/SODM_ECOLI SODM_ECOLI] Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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==See Also==
==See Also==
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*[[Superoxide Dismutase|Superoxide Dismutase]]
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*[[Superoxide dismutase 3D structures|Superoxide dismutase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Ecoli]]
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[[Category: Escherichia coli K-12]]
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[[Category: Superoxide dismutase]]
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[[Category: Large Structures]]
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[[Category: Borgstahl, G E.O]]
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[[Category: Borgstahl GEO]]
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[[Category: Porta, J C]]
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[[Category: Porta JC]]
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[[Category: Vahedi-Faridi, A]]
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[[Category: Vahedi-Faridi A]]
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[[Category: Manganese]]
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[[Category: Manganese superoxide dismutase]]
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[[Category: Metal-binding]]
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[[Category: Oxidoreductase]]
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[[Category: Peroxide-bound]]
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Current revision

Crystal structure of the peroxide-bound manganese superoxide dismutase.

PDB ID 3k9s

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