3ki8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:16, 6 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3ki8' size='340' side='right'caption='[[3ki8]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='3ki8' size='340' side='right'caption='[[3ki8]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3ki8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrab Pyrab]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KI8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KI8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3ki8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_abyssi_GE5 Pyrococcus abyssi GE5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KI8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KI8 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSD:3-SULFINOALANINE'>CSD</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=CSD:3-SULFINOALANINE'>CSD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nit-30, PAB1449, PYRAB13990 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272844 PYRAB])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Beta-ureidopropionase Beta-ureidopropionase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.6 3.5.1.6] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ki8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ki8 OCA], [https://pdbe.org/3ki8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ki8 RCSB], [https://www.ebi.ac.uk/pdbsum/3ki8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ki8 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ki8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ki8 OCA], [https://pdbe.org/3ki8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ki8 RCSB], [https://www.ebi.ac.uk/pdbsum/3ki8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ki8 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/NITR_PYRAB NITR_PYRAB] Nitrilase that hydrolyzes preferentially aliphatic nitriles like malononitrile and fumaronitrile in vitro. These dinitriles are converted to the corresponding monoacid mononitriles, showing the enzyme is regioselective. Cannot hydrolyze compounds with a nitrile group bound to an aromatic ring or amino acid. Its biological role is unknown.<ref>PMID:16495079</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Beta-ureidopropionase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Pyrab]]
+
[[Category: Pyrococcus abyssi GE5]]
-
[[Category: Antranikian, G]]
+
[[Category: Antranikian G]]
-
[[Category: Raczynska, J]]
+
[[Category: Raczynska J]]
-
[[Category: Rypniewski, W]]
+
[[Category: Rypniewski W]]
-
[[Category: Vorgias, C]]
+
[[Category: Vorgias C]]
-
[[Category: Alpha-beta sandwich]]
+
-
[[Category: Hydrolase]]
+

Current revision

Crystal structure of hyperthermophilic nitrilase

PDB ID 3ki8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3ki8"
Personal tools