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3ly0

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Current revision (08:45, 6 September 2023) (edit) (undo)
 
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==Crystal structure of metallo peptidase from Rhodobacter sphaeroides liganded with phosphinate mimic of dipeptide L-Ala-D-Ala==
==Crystal structure of metallo peptidase from Rhodobacter sphaeroides liganded with phosphinate mimic of dipeptide L-Ala-D-Ala==
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<StructureSection load='3ly0' size='340' side='right' caption='[[3ly0]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
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<StructureSection load='3ly0' size='340' side='right'caption='[[3ly0]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3ly0]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhos4 Rhos4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LY0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LY0 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3ly0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cereibacter_sphaeroides_2.4.1 Cereibacter sphaeroides 2.4.1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LY0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LY0 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=LY0:(2R)-3-[(R)-[(1R)-1-AMINOETHYL](HYDROXY)PHOSPHORYL]-2-METHYLPROPANOIC+ACID'>LY0</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.399&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RHOS4_24130, RSP_0802 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272943 RHOS4])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LY0:(2R)-3-[(R)-[(1R)-1-AMINOETHYL](HYDROXY)PHOSPHORYL]-2-METHYLPROPANOIC+ACID'>LY0</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ly0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ly0 OCA], [http://pdbe.org/3ly0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ly0 RCSB], [http://www.ebi.ac.uk/pdbsum/3ly0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ly0 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ly0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ly0 OCA], [https://pdbe.org/3ly0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ly0 RCSB], [https://www.ebi.ac.uk/pdbsum/3ly0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ly0 ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q3IZQ3_CERS4 Q3IZQ3_CERS4]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Rhos4]]
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[[Category: Cereibacter sphaeroides 2 4.1]]
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[[Category: Almo, S C]]
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[[Category: Large Structures]]
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[[Category: Burley, S K]]
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[[Category: Almo SC]]
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[[Category: Cummings, J]]
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[[Category: Burley SK]]
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[[Category: Fedorov, A A]]
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[[Category: Cummings J]]
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[[Category: Fedorov, E V]]
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[[Category: Fedorov AA]]
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[[Category: Structural genomic]]
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[[Category: Fedorov EV]]
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[[Category: Raushel, F M]]
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[[Category: Raushel FM]]
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[[Category: Hydrolase]]
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[[Category: Metallo peptidase]]
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[[Category: Nysgrc]]
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[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
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[[Category: Phosphinate inhibitor]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Target 9523c]]
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Current revision

Crystal structure of metallo peptidase from Rhodobacter sphaeroides liganded with phosphinate mimic of dipeptide L-Ala-D-Ala

PDB ID 3ly0

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