This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3m9q

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:50, 6 September 2023) (edit) (undo)
 
Line 1: Line 1:
==Drosophila MSL3 chromodomain==
==Drosophila MSL3 chromodomain==
-
<StructureSection load='3m9q' size='340' side='right' caption='[[3m9q]], [[Resolution|resolution]] 1.29&Aring;' scene=''>
+
<StructureSection load='3m9q' size='340' side='right'caption='[[3m9q]], [[Resolution|resolution]] 1.29&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3m9q]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Drome Drome]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M9Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3M9Q FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3m9q]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M9Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3M9Q FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3m9p|3m9p]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.29&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">msl-3, CG8631 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7227 DROME])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3m9q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m9q OCA], [https://pdbe.org/3m9q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3m9q RCSB], [https://www.ebi.ac.uk/pdbsum/3m9q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3m9q ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3m9q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m9q OCA], [http://pdbe.org/3m9q PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3m9q RCSB], [http://www.ebi.ac.uk/pdbsum/3m9q PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3m9q ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/MSL3_DROME MSL3_DROME]] The MSL proteins are essential for elevating transcription of the single X chromosome in the male (X chromosome dosage compensation). Mle, msl-1 and msl-3 are colocalized on the X chromosome. Each of the MSL proteins requires all the other MSLs for wild-type X-chromosome binding.<ref>PMID:7768187</ref>
+
[https://www.uniprot.org/uniprot/MSL3_DROME MSL3_DROME] The MSL proteins are essential for elevating transcription of the single X chromosome in the male (X chromosome dosage compensation). Mle, msl-1 and msl-3 are colocalized on the X chromosome. Each of the MSL proteins requires all the other MSLs for wild-type X-chromosome binding.<ref>PMID:7768187</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m9/3m9q_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m9/3m9q_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 33: Line 32:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Drome]]
+
[[Category: Drosophila melanogaster]]
-
[[Category: Huang, P]]
+
[[Category: Large Structures]]
-
[[Category: Khorasanizadeh, S]]
+
[[Category: Huang P]]
-
[[Category: Kim, D]]
+
[[Category: Khorasanizadeh S]]
-
[[Category: Rastinejad, F]]
+
[[Category: Kim D]]
-
[[Category: Aromatic cage]]
+
[[Category: Rastinejad F]]
-
[[Category: Chromodomain]]
+
-
[[Category: Dna binding protein]]
+
-
[[Category: Methyllysine recognition]]
+
-
[[Category: Msl complex]]
+
-
[[Category: Msl3]]
+
-
[[Category: Transcription upregulation]]
+

Current revision

Drosophila MSL3 chromodomain

PDB ID 3m9q

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3m9q"
Personal tools