3ny0

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Current revision (09:24, 6 September 2023) (edit) (undo)
 
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==Crystal Structure of UreE from Helicobacter pylori (Ni2+ bound form)==
==Crystal Structure of UreE from Helicobacter pylori (Ni2+ bound form)==
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<StructureSection load='3ny0' size='340' side='right' caption='[[3ny0]], [[Resolution|resolution]] 3.09&Aring;' scene=''>
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<StructureSection load='3ny0' size='340' side='right'caption='[[3ny0]], [[Resolution|resolution]] 3.09&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3ny0]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43504 Atcc 43504]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NY0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NY0 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3ny0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NY0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NY0 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.09&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3l9z|3l9z]], [[3la0|3la0]], [[3nxz|3nxz]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HP_0070, ureE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=210 ATCC 43504])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ny0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ny0 OCA], [https://pdbe.org/3ny0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ny0 RCSB], [https://www.ebi.ac.uk/pdbsum/3ny0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ny0 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ny0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ny0 OCA], [http://pdbe.org/3ny0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ny0 RCSB], [http://www.ebi.ac.uk/pdbsum/3ny0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ny0 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/UREE_HELPY UREE_HELPY]] Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly (By similarity).
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[https://www.uniprot.org/uniprot/UREE_HELPY UREE_HELPY] Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ny/3ny0_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ny/3ny0_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Atcc 43504]]
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[[Category: Helicobacter pylori]]
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[[Category: Assinas, A]]
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[[Category: Large Structures]]
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[[Category: Structural genomic]]
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[[Category: Assinas A]]
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[[Category: Cygler, M]]
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[[Category: Cygler M]]
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[[Category: Matte, A]]
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[[Category: Matte A]]
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[[Category: Munger, C]]
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[[Category: Munger C]]
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[[Category: Shi, R]]
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[[Category: Shi R]]
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[[Category: Bsgi]]
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[[Category: Metal binding protein]]
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[[Category: Urease maturation protein]]
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Current revision

Crystal Structure of UreE from Helicobacter pylori (Ni2+ bound form)

PDB ID 3ny0

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