This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3oj6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:40, 6 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3oj6' size='340' side='right'caption='[[3oj6]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='3oj6' size='340' side='right'caption='[[3oj6]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3oj6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Cocit Cocit]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OJ6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3OJ6 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3oj6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Coccidioides_immitis Coccidioides immitis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OJ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OJ6 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Blasticidin-S_deaminase Blasticidin-S deaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.4.23 3.5.4.23] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3oj6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oj6 OCA], [http://pdbe.org/3oj6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3oj6 RCSB], [http://www.ebi.ac.uk/pdbsum/3oj6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3oj6 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3oj6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oj6 OCA], [https://pdbe.org/3oj6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3oj6 RCSB], [https://www.ebi.ac.uk/pdbsum/3oj6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3oj6 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BSD_COCIM BSD_COCIM] Catalyzes the deamination of the cytosine moiety of the antibiotics blasticidin S, cytomycin and acetylblasticidin S.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 23: Line 25:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Blasticidin-S deaminase]]
+
[[Category: Coccidioides immitis]]
-
[[Category: Cocit]]
+
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Structural genomic]]
 
-
[[Category: Blasticidin s deaminase]]
 
-
[[Category: Hydrolase]]
 
-
[[Category: Ssgcid]]
 

Current revision

Crystal structure of Blasticidin S Deaminase from Coccidioides Immitis

PDB ID 3oj6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools