This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3pc7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:51, 6 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3pc7' size='340' side='right'caption='[[3pc7]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
<StructureSection load='3pc7' size='340' side='right'caption='[[3pc7]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3pc7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PC7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PC7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3pc7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PC7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PC7 FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3pc6|3pc6]], [[3pc8|3pc8]], [[3qvg|3qvg]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LIG3 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/DNA_ligase_(ATP) DNA ligase (ATP)], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.5.1.1 6.5.1.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pc7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pc7 OCA], [https://pdbe.org/3pc7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pc7 RCSB], [https://www.ebi.ac.uk/pdbsum/3pc7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pc7 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pc7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pc7 OCA], [https://pdbe.org/3pc7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pc7 RCSB], [https://www.ebi.ac.uk/pdbsum/3pc7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pc7 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/DNLI3_HUMAN DNLI3_HUMAN]] Interacts with DNA-repair protein XRCC1 and can correct defective DNA strand-break repair and sister chromatid exchange following treatment with ionizing radiation and alkylating agents.
+
[https://www.uniprot.org/uniprot/DNLI3_HUMAN DNLI3_HUMAN] Interacts with DNA-repair protein XRCC1 and can correct defective DNA strand-break repair and sister chromatid exchange following treatment with ionizing radiation and alkylating agents.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 28: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Cuneo, M J]]
+
[[Category: Cuneo MJ]]
-
[[Category: Krahn, J M]]
+
[[Category: Krahn JM]]
-
[[Category: London, R E]]
+
[[Category: London RE]]
-
[[Category: Brct domain]]
+
-
[[Category: Dna binding protein]]
+
-
[[Category: Dna repair]]
+
-
[[Category: Ligase]]
+
-
[[Category: Protein:protein interaction]]
+
-
[[Category: Xrcc1 brct2 domain]]
+

Current revision

X-ray crystal structure of the DNA ligase III-alpha BRCT domain.

PDB ID 3pc7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools