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5jaz

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Current revision (10:57, 6 September 2023) (edit) (undo)
 
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<StructureSection load='5jaz' size='340' side='right'caption='[[5jaz]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
<StructureSection load='5jaz' size='340' side='right'caption='[[5jaz]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5jaz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Plaf7 Plaf7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JAZ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5JAZ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5jaz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum_3D7 Plasmodium falciparum 3D7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JAZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JAZ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=LC5:[(2R)-2-{2-[HYDROXY(METHYL)AMINO]-2-OXOETHYL}-5-(NAPHTHALEN-1-YL)PENTYL]PHOSPHONIC+ACID'>LC5</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DXR, PF14_0641 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=36329 PLAF7])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=LC5:[(2R)-2-{2-[HYDROXY(METHYL)AMINO]-2-OXOETHYL}-5-(NAPHTHALEN-1-YL)PENTYL]PHOSPHONIC+ACID'>LC5</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/1-deoxy-D-xylulose-5-phosphate_reductoisomerase 1-deoxy-D-xylulose-5-phosphate reductoisomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.267 1.1.1.267] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jaz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jaz OCA], [https://pdbe.org/5jaz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jaz RCSB], [https://www.ebi.ac.uk/pdbsum/5jaz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jaz ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5jaz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jaz OCA], [http://pdbe.org/5jaz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jaz RCSB], [http://www.ebi.ac.uk/pdbsum/5jaz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jaz ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/DXR_PLAF7 DXR_PLAF7]] Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).
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[https://www.uniprot.org/uniprot/DXR_PLAF7 DXR_PLAF7] Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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==See Also==
==See Also==
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*[[DXP reductoisomerase|DXP reductoisomerase]]
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*[[DXP reductoisomerase 3D Structures|DXP reductoisomerase 3D Structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: 1-deoxy-D-xylulose-5-phosphate reductoisomerase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Plaf7]]
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[[Category: Plasmodium falciparum 3D7]]
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[[Category: Bergfors, T]]
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[[Category: Bergfors T]]
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[[Category: Jones, T A]]
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[[Category: Jones TA]]
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[[Category: Mowbray, S L]]
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[[Category: Mowbray SL]]
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[[Category: Sooriyaarachchi, S]]
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[[Category: Sooriyaarachchi S]]
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[[Category: Enzyme-inhibitor complex]]
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[[Category: Isoprenoid biosynthesis]]
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[[Category: Mep pathway]]
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[[Category: Oxidoreductase]]
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Current revision

Structure of Plasmodium falciparum DXR in complex with a beta-substituted fosmidomycin analogue, LC51 and manganese

PDB ID 5jaz

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