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Proliferating cell nuclear antigen 3D structures

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Current revision (07:01, 13 September 2023) (edit) (undo)
 
Line 6: Line 6:
*Unliganded PCNA
*Unliganded PCNA
-
**[[1vym]], [[1w60]], [[3vkx]] – hPCNA - human<br />
+
**[[1vym]], [[1w60]], [[3vkx]], [[6fcm]] – hPCNA - human<br />
-
**[[5mom]], [[5e0t]] – hPCNA (mutant)<br />
+
**[[5mom]], [[5e0t]], [[8e84]] – hPCNA (mutant)<br />
**[[3lox]], [[1plq]], [[1plr]], [[4yhr]], [[5t9d]] – yPCNA - yeast<br />
**[[3lox]], [[1plq]], [[1plr]], [[4yhr]], [[5t9d]] – yPCNA - yeast<br />
**[[3f1x]], [[3gpm]], [[3gpn]], [[3f1w]], [[4l60]], [[4l6p]], [[6cx2]], [[6cx3]], [[6cx4]], [[5v7m]], [[5v7l]], [[5v7k]], [[6d0r]], [[6d0q]], [[6cx4]], [[6cx3]], [[6cx2]], [[6w9w]], [[6wac]] - yPCNA (mutant)<br />
**[[3f1x]], [[3gpm]], [[3gpn]], [[3f1w]], [[4l60]], [[4l6p]], [[6cx2]], [[6cx3]], [[6cx4]], [[5v7m]], [[5v7l]], [[5v7k]], [[6d0r]], [[6d0q]], [[6cx4]], [[6cx3]], [[6cx2]], [[6w9w]], [[6wac]] - yPCNA (mutant)<br />
Line 31: Line 31:
**[[7ep8]] – PCNA – ''Neurospora crassa''<br />
**[[7ep8]] – PCNA – ''Neurospora crassa''<br />
**[[7bup]] – PCNA – ''Candida albicans''<br />
**[[7bup]] – PCNA – ''Candida albicans''<br />
 +
**[[7n5i]], [[7n5j]], [[7n5k]], [[7n5l]], [[7n5m]], [[7n5n]] – PCNA – ''Thermococcus gammatolerans''<br />
 +
**[[6j0j]] – LdPCNA – ''Leishmania donovani''<br />
 +
**[[5tup]] – PCNA – ''Aspergillus fumigatus''<br />
 +
**[[7o1e]] – CtPCNA – ''Chaetomium thermophilum''<br />
 +
**[[7ype]], [[7ypf]] – PCNA – African swine fever virus<br />
*PCNA + Dpo
*PCNA + Dpo
Line 44: Line 49:
**[[3a2f]] - PfPCNA + Dpo<br />
**[[3a2f]] - PfPCNA + Dpo<br />
-
*PCNA complexes
+
*PCNA complexes with peptide
-
**[[1vyj]], [[1u76]], [[1u7b]], [[6cbi]], [[5yd8]], [[5yco]], [[5mlw]], [[5mlo]], [[5mav]], [[5iy4]], [[4ztd]], [[4rjf]], [[6fcn]], [[7kq0]], [[7kq1]], [[7m5l]], [[7m5m]], [[7m5n]] – hPCNA + peptide<br />
+
**[[1vyj]], [[1u76]], [[1u7b]], [[6cbi]], [[5yd8]], [[5yco]], [[5mlw]], [[5mlo]], [[5mav]], [[5iy4]], [[4ztd]], [[4rjf]], [[6fcn]], [[7kq0]], [[7kq1]], [[7m5l]], [[7m5m]], [[7m5n]], [[8cob]] – hPCNA + peptide
**[[5e0u]] - hPCNA (mutant) + peptide<br />
**[[5e0u]] - hPCNA (mutant) + peptide<br />
**[[4d2g]], [[6gws]] – hPCNA + p15 peptide<br />
**[[4d2g]], [[6gws]] – hPCNA + p15 peptide<br />
Line 59: Line 64:
**[[6gws]] – hPCNA + PCNA-associated factor peptide<br />
**[[6gws]] – hPCNA + PCNA-associated factor peptide<br />
**[[6eht]] – hPCNA + PCNA-associated factor peptide + DNA<br />
**[[6eht]] – hPCNA + PCNA-associated factor peptide + DNA<br />
-
**[[4ztd]] - hPCNA + ubiquitin ligase peptide<br />
+
**[[6o09]] – AtPCNA + peptide<br />
-
**[[3wgw]] – hPCNA + inhibitor<br />
+
**[[1rxm]] – AfPCNA + Flap endonuclease-1 peptide<br />
-
**[[6gis]] – hPCNA + DNA<br />
+
**[[2od8]], [[5zut]] – yPCNA + peptide <br />
 +
**[[6qh1]] – PCNA + SPD1 peptide – fission yeast<br />
 +
**[[7o1f]] – CtPCNA + peptide <br />
 +
 
 +
*PCNA complexes with protein
 +
 
**[[7efa]] – hPCNA + adenine DNA glycosylase<br />
**[[7efa]] – hPCNA + adenine DNA glycosylase<br />
-
**[[4rjf]] - hPCNA + p21 peptide<br />
+
**[[1axc]] – hPCNA + P21/WAF1 C-terminal<br />
-
**[[5e0u]] - hPCNA (mutant) + p21<br />
+
**[[1ul1]] – hPCNA + Flap endonuclease-1<br />
-
**[[1axc]] - hPCNA + P21/WAF1 C-terminat<br />
+
**[[3p87]] – hPCNA + RNase H2 subunit B (mutant) <br />
-
**[[1ul1]] - hPCNA + Flap exonuclease-1<br />
+
-
**[[5e0v]] - hPCNA (mutant) + Flap endonoclease 1 <br />
+
-
**[[3p87]] - hPCNA + RNase H2 subunit B (mutant)<br />
+
**[[3tbl]] - hPCNA + ubiquitin<br />
**[[3tbl]] - hPCNA + ubiquitin<br />
 +
**[[8b8t]] - hPCNA + DNA ligase 1 – Cryo EM<br />
 +
**[[7qnz]] - hPCNA + DNA ligase 1 + DNA – Cryo EM<br />
 +
**[[7qo1]] - hPCNA + DNA ligase 1 + flap endonuclease + DNA – Cryo EM<br />
**[[6vvo]] – hPCNA + replication factors 1-5 – Cryo EM<br />
**[[6vvo]] – hPCNA + replication factors 1-5 – Cryo EM<br />
-
**[[2zvw]], [[2zvv]] - AtPCNA + cyclin-dependent kinase inhibitor 1 - ''Arabidopsis thaliana''<br />
+
**[[7u19]], [[7u1a]], [[7u1p]] – hPCNA + replication factors 1-5 + DNA – Cryo EM<br />
-
**[[6o09]] – AtPCNA + peptide<br />
+
**[[2zvw]], [[2zvv]] – AtPCNA + cyclin-dependent kinase inhibitor 1 – Arabidopsis thaliana
-
**[[5iy4]] - hPCNA + DVC1 PIP box<br />
+
**[[7thj]], [[7thv]], [[7ti8]], [[7tic]], [[7tku]] – yPCNA + replication factors 1-5 – Cryo EM<br />
-
**[[5mlo]], [[5mlw]] - hPCNA + ZRANB3 peptide<br />
+
**[[7tfh]], [[7tfi]], [[7tfj]], [[7tib]], [[7tid]], [[8dqx]], [[8dqz]], [[8dr0]], [[8dr1]], [[8dr3]], [[8dr4]], [[8dr5]], [[8dr6]], [[8dr7]] – yPCNA + replication factors 1-5 + DNA – Cryo EM<br />
-
**[[5mav]] - hPCNA + PARG peptidee<br />
+
**[[3l0w]], [[3l10]] - yPCNA + monoubiquinated PCNA<br />
-
**[[6gis]] - hPCNA + DNA<br />
+
-
**[[3l0w]], [[3l10]] - yPCNA + monoubiquinated PCNA<br />
+
**[[1sxj]] – yPCNA + replication factor C<br />
**[[1sxj]] – yPCNA + replication factor C<br />
-
**[[2od8]] - yPCNA + DNA ligase fragment<br />
 
-
**[[3k4x]] - yPCNA + DNA<br />
 
**[[3v60]], [[3v61]] – yPCNA (mutant) + ubiquitin-like protein SMT3<br />
**[[3v60]], [[3v61]] – yPCNA (mutant) + ubiquitin-like protein SMT3<br />
 +
**[[5jne]] - yPCNA (mutant) + ubiquitin-like protein SMT3 + UBC9<br />
**[[3v62]] – yPCNA (mutant) + ubiquitin-like protein SMT3 + ATP-dependent DNA helicase SRS2<br />
**[[3v62]] – yPCNA (mutant) + ubiquitin-like protein SMT3 + ATP-dependent DNA helicase SRS2<br />
-
**[[5zut]] – yPCNA + peptide <br />
 
-
**[[6qh1]] – PCNA + SPD1 peptide – fission yeast<br />
 
-
**[[5jne]] - yPCNA (mutant) + SMT3 + E2<br />
 
**[[2izo]] - SsPCNA B + PCNA C + Flap structure-specific endonuclease<br />
**[[2izo]] - SsPCNA B + PCNA C + Flap structure-specific endonuclease<br />
**[[1isq]] - PfPCNA (mutant) + replication factor C large subunit<br />
**[[1isq]] - PfPCNA (mutant) + replication factor C large subunit<br />
-
**[[5da7]] - TkPCNA + protein inhibitor<br />
+
**[[3p83]] - AfPCNA + RNase HII<br />
-
**[[3p83]] - AfPCNA + RNase H2<br />
+
-
**[[1rxm]] – AfPCNA + Flap exonuclease-1 peptide<br />
+
**[[1rxz]] - AfPCNA + Flap structure-specific endonuclease<br />
**[[1rxz]] - AfPCNA + Flap structure-specific endonuclease<br />
 +
 +
*PCNA complexes with smaller molecules
 +
 +
**[[3wgw]], [[8gl9]], [[8gla]] – hPCNA + inhibitor<br />
 +
**[[6gis]] – hPCNA + DNA<br />
 +
**[[3k4x]] - yPCNA + DNA<br />
 +
**[[6k2m]] – LdPCNA + Arg <br />
*PCNA homolog or DNA polymerase sliding clamp
*PCNA homolog or DNA polymerase sliding clamp

Current revision

3D Structures of Proliferating Cell Nuclear Antigen

Updated on 13-September-2023

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman

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