8h5b
From Proteopedia
(Difference between revisions)
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| - | '''Unreleased structure''' | ||
| - | The | + | ==The cryo-EM structure of nuclear transport receptor Kap114p complex with yeast TATA-box binding protein== |
| + | <StructureSection load='8h5b' size='340' side='right'caption='[[8h5b]], [[Resolution|resolution]] 4.03Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[8h5b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8H5B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8H5B FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.03Å</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8h5b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8h5b OCA], [https://pdbe.org/8h5b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8h5b RCSB], [https://www.ebi.ac.uk/pdbsum/8h5b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8h5b ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/IMB5_YEAST IMB5_YEAST] Required for nuclear protein import and mediates docking of import substrate to distinct nucleoporins. Serves a receptor for nuclear localization signals. Mediates the nuclear import of TATA-binding protein (TBP) and of histones H2A and H2B.<ref>PMID:10535958</ref> <ref>PMID:11309407</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The transcription factor TATA-box binding protein (TBP) modulates gene expression in nuclei. This process requires the involvement of nuclear transport receptors, collectively termed karyopherin-beta (Kap-beta) in yeast, and various regulatory factors. In previous studies we showed that Kap114p, a Kap-beta that mediates nuclear import of yeast TBP (yTBP), modulates yTBP-dependent transcription. However, how Kap114p associates with yTBP to exert its multifaceted functions has remained elusive. Here, we employ single-particle cryo-electron microscopy to determine the structure of Kap114p in complex with the core domain of yTBP (yTBP(C)). Remarkably, Kap114p wraps around the yTBP(C) N-terminal lobe, revealing a structure resembling transcriptional regulators in complex with TBP, suggesting convergent evolution of the two protein groups for a common function. We further demonstrate that Kap114p sequesters yTBP away from promoters, preventing a collapse of yTBP dynamics required for yeast responses to environmental stress. Hence, we demonstrate that nuclear transport receptors represent critical elements of the transcriptional regulatory network. | ||
| - | + | Structural convergence endows nuclear transport receptor Kap114p with a transcriptional repressor function toward TATA-binding protein.,Liao CC, Wang YS, Pi WC, Wang CH, Wu YM, Chen WY, Hsia KC Nat Commun. 2023 Sep 8;14(1):5518. doi: 10.1038/s41467-023-41206-9. PMID:37684250<ref>PMID:37684250</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: Hsia | + | <div class="pdbe-citations 8h5b" style="background-color:#fffaf0;"></div> |
| - | [[Category: | + | == References == |
| - | [[Category: Wang | + | <references/> |
| - | [[Category: | + | __TOC__ |
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Saccharomyces cerevisiae S288C]] | ||
| + | [[Category: Hsia KC]] | ||
| + | [[Category: Liao CC]] | ||
| + | [[Category: Wang CH]] | ||
| + | [[Category: Wu YM]] | ||
Current revision
The cryo-EM structure of nuclear transport receptor Kap114p complex with yeast TATA-box binding protein
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