4v53

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Current revision (18:03, 20 September 2023) (edit) (undo)
 
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== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4v53]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qb9 2qb9], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qba 2qba], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qbb 2qbb] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qbc 2qbc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4V53 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4V53 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4v53]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qb9 2qb9], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qba 2qba], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qbb 2qbb] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2qbc 2qbc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4V53 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4V53 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LLL:(2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDROXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL'>LLL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.54&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LLL:(2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDROXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL'>LLL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4v53 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4v53 OCA], [https://pdbe.org/4v53 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4v53 RCSB], [https://www.ebi.ac.uk/pdbsum/4v53 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4v53 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4v53 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4v53 OCA], [https://pdbe.org/4v53 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4v53 RCSB], [https://www.ebi.ac.uk/pdbsum/4v53 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4v53 ProSAT]</span></td></tr>
</table>
</table>

Current revision

Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.

PDB ID 4v53

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