4v9l
From Proteopedia
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4v9l]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces Streptomyces] and [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB27 Thermus thermophilus HB27]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4kd8 4kd8], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4kd9 4kd9], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4kda 4kda] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4kdb 4kdb]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4V9L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4V9L FirstGlance]. <br> | <table><tr><td colspan='2'>[[4v9l]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces Streptomyces] and [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB27 Thermus thermophilus HB27]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4kd8 4kd8], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4kd9 4kd9], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4kda 4kda] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4kdb 4kdb]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4V9L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4V9L FirstGlance]. <br> | ||
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5OH:(2S)-AMINO[(4R,6S)-2-AMINO-6-HYDROXY-3,4,5,6-TETRAHYDROPYRIMIDIN-4-YL]ETHANOIC+ACID'>5OH</scene>, <scene name='pdbligand=DPP:DIAMINOPROPANOIC+ACID'>DPP</scene>, <scene name='pdbligand=FUA:FUSIDIC+ACID'>FUA</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=KBE:BETA-LYSINE'>KBE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UAL:(2Z)-2-AMINO-3-(CARBAMOYLAMINO)PROP-2-ENOIC+ACID'>UAL</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5OH:(2S)-AMINO[(4R,6S)-2-AMINO-6-HYDROXY-3,4,5,6-TETRAHYDROPYRIMIDIN-4-YL]ETHANOIC+ACID'>5OH</scene>, <scene name='pdbligand=DPP:DIAMINOPROPANOIC+ACID'>DPP</scene>, <scene name='pdbligand=FUA:FUSIDIC+ACID'>FUA</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=KBE:BETA-LYSINE'>KBE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UAL:(2Z)-2-AMINO-3-(CARBAMOYLAMINO)PROP-2-ENOIC+ACID'>UAL</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4v9l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4v9l OCA], [https://pdbe.org/4v9l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4v9l RCSB], [https://www.ebi.ac.uk/pdbsum/4v9l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4v9l ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4v9l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4v9l OCA], [https://pdbe.org/4v9l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4v9l RCSB], [https://www.ebi.ac.uk/pdbsum/4v9l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4v9l ProSAT]</span></td></tr> | ||
</table> | </table> | ||
Current revision
70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.
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