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| <StructureSection load='2zf9' size='340' side='right'caption='[[2zf9]], [[Resolution|resolution]] 1.95Å' scene=''> | | <StructureSection load='2zf9' size='340' side='right'caption='[[2zf9]], [[Resolution|resolution]] 1.95Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[2zf9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_19208 Atcc 19208]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZF9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZF9 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2zf9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruminococcus_flavefaciens Ruminococcus flavefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZF9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZF9 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95Å</td></tr> |
- | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1tyj|1tyj]], [[1zv9|1zv9]], [[1g1k|1g1k]], [[2bm3|2bm3]], [[1anu|1anu]], [[1ohz|1ohz]], [[1aoh|1aoh]], [[2b59|2b59]]</div></td></tr>
| + | |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">scaE ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1265 ATCC 19208])</td></tr>
| + | |
| <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zf9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zf9 OCA], [https://pdbe.org/2zf9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zf9 RCSB], [https://www.ebi.ac.uk/pdbsum/2zf9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zf9 ProSAT]</span></td></tr> | | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zf9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zf9 OCA], [https://pdbe.org/2zf9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zf9 RCSB], [https://www.ebi.ac.uk/pdbsum/2zf9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zf9 ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q4A3Y2_RUMFL Q4A3Y2_RUMFL] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Atcc 19208]] | |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Alber, O]] | + | [[Category: Ruminococcus flavefaciens]] |
- | [[Category: Bayer, E]] | + | [[Category: Alber O]] |
- | [[Category: Frolow, F]] | + | [[Category: Bayer E]] |
- | [[Category: Alpha helix]] | + | [[Category: Frolow F]] |
- | [[Category: Anchoring module]]
| + | |
- | [[Category: Beta flap]]
| + | |
- | [[Category: Dockerin-binding module]]
| + | |
- | [[Category: Structural protein]]
| + | |
| Structural highlights
Function
Q4A3Y2_RUMFL
Publication Abstract from PubMed
The cellulosome is an intriguing multienzyme complex found in cellulolytic bacteria that plays a key role in the degradation of plant cell-wall polysaccharides. In Ruminococcus flavefaciens, a predominant fiber-degrading bacterium found in ruminants, the cellulosome is anchored to the bacterial cell wall through a relatively short ScaE scaffoldin. Determination of the crystal structure of the lone type-III ScaE cohesin from R. flavefaciens (Rf-CohE) was initiated as a part of a structural effort to define cellulosome assembly. The structure was determined at 1.95 A resolution by single-wavelength anomalous diffraction. This is the first detailed description of a crystal structure for a type-III cohesin, and its features were compared with those of the known type-I and type-II cohesin structures. The Rf-CohE module folds into a nine-stranded beta-sandwich with jellyroll topology, typically observed for cohesins, and includes two beta-flaps in the midst of beta-strands 4 and 8, similar to the type-II cohesin structures. However, the presence in Rf-CohE of an additional 13-residue alpha-helix located between beta-strands 8 and 9 represents a dramatic divergence from other known cohesin structures. The prominent alpha-helix is enveloped by an extensive N-terminal loop, not observed in any other known cohesin, which embraces the helix presumably enhancing its stability. A planar surface at the upper portion of the front face of the molecule, bordered bybeta-flap 8, exhibits plausible dimensions and exposed amino acid residues to accommodate the dockerin-binding site. Proteins 2009. (c) 2009 Wiley-Liss, Inc.
Cohesin diversity revealed by the crystal structure of the anchoring cohesin from Ruminococcus flavefaciens.,Alber O, Noach I, Rincon MT, Flint HJ, Shimon LJ, Lamed R, Frolow F, Bayer EA Proteins. 2009 May 18;77(3):699-709. PMID:19544570[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Alber O, Noach I, Rincon MT, Flint HJ, Shimon LJ, Lamed R, Frolow F, Bayer EA. Cohesin diversity revealed by the crystal structure of the anchoring cohesin from Ruminococcus flavefaciens. Proteins. 2009 May 18;77(3):699-709. PMID:19544570 doi:10.1002/prot.22483
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