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5jov

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Current revision (19:01, 20 September 2023) (edit) (undo)
 
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<StructureSection load='5jov' size='340' side='right'caption='[[5jov]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='5jov' size='340' side='right'caption='[[5jov]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5jov]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JOV OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5JOV FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5jov]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_ovatus Bacteroides ovatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JOV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JOV FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=B9D:(2R,3R,4R,5S,6R)-6-FLUORANYL-6-(HYDROXYMETHYL)OXANE-2,3,4,5-TETROL'>B9D</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha-D-xyloside_xylohydrolase Alpha-D-xyloside xylohydrolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.177 3.2.1.177] </span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=B9D:(2R,3R,4R,5S,6R)-6-FLUORANYL-6-(HYDROXYMETHYL)OXANE-2,3,4,5-TETROL'>B9D</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5jov FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jov OCA], [http://pdbe.org/5jov PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jov RCSB], [http://www.ebi.ac.uk/pdbsum/5jov PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jov ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jov FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jov OCA], [https://pdbe.org/5jov PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jov RCSB], [https://www.ebi.ac.uk/pdbsum/5jov PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jov ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/GH31A_BACO1 GH31A_BACO1]] Catalyzes the liberation of alpha-xylose from the non-reducing terminal glucose of xyloglucan oligosaccharides in xyloglucan degradation, converting the 'X' to 'G' units.<ref>PMID:24463512</ref>
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[https://www.uniprot.org/uniprot/GH31A_BACO1 GH31A_BACO1] Catalyzes the liberation of alpha-xylose from the non-reducing terminal glucose of xyloglucan oligosaccharides in xyloglucan degradation, converting the 'X' to 'G' units.<ref>PMID:24463512</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Alpha-D-xyloside xylohydrolase]]
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[[Category: Bacteroides ovatus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Brumer, H]]
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[[Category: Brumer H]]
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[[Category: Coyle, T]]
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[[Category: Coyle T]]
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[[Category: Davies, G J]]
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[[Category: Davies GJ]]
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[[Category: Hemsworth, G R]]
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[[Category: Hemsworth GR]]
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[[Category: Larsbrink, J]]
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[[Category: Larsbrink J]]
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[[Category: Sobala, L F]]
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[[Category: Sobala LF]]
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[[Category: Spadiut, O]]
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[[Category: Spadiut O]]
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[[Category: Stepper, J]]
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[[Category: Stepper J]]
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[[Category: Stubbs, K A]]
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[[Category: Stubbs KA]]
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[[Category: Thompson, A J]]
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[[Category: Thompson AJ]]
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[[Category: Gh31]]
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[[Category: Glycoside hydrolase]]
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[[Category: Hydrolase]]
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Current revision

Bacteroides ovatus Xyloglucan PUL GH31 with bound 5FIdoF

PDB ID 5jov

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