This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5jvd
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='5jvd' size='340' side='right'caption='[[5jvd]], [[Resolution|resolution]] 2.39Å' scene=''> | <StructureSection load='5jvd' size='340' side='right'caption='[[5jvd]], [[Resolution|resolution]] 2.39Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5jvd]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5jvd]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus], [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus] and [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JVD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JVD FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6NL:(2E)-3-(3-HYDROXY-4-METHOXYPHENYL)-1-(7-METHOXY-2H-1,3-BENZODIOXOL-5-YL)-2-METHYLPROP-2-EN-1-ONE'>6NL</scene>, <scene name='pdbligand=ACP:PHOSPHOMETHYLPHOSPHONIC+ACID+ADENYLATE+ESTER'>ACP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.393Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6NL:(2E)-3-(3-HYDROXY-4-METHOXYPHENYL)-1-(7-METHOXY-2H-1,3-BENZODIOXOL-5-YL)-2-METHYLPROP-2-EN-1-ONE'>6NL</scene>, <scene name='pdbligand=ACP:PHOSPHOMETHYLPHOSPHONIC+ACID+ADENYLATE+ESTER'>ACP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jvd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jvd OCA], [https://pdbe.org/5jvd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jvd RCSB], [https://www.ebi.ac.uk/pdbsum/5jvd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jvd ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/TBA1B_BOVIN TBA1B_BOVIN] Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 23: | Line 23: | ||
*[[Stathmin-4 3D structures|Stathmin-4 3D structures]] | *[[Stathmin-4 3D structures|Stathmin-4 3D structures]] | ||
*[[Tubulin 3D Structures|Tubulin 3D Structures]] | *[[Tubulin 3D Structures|Tubulin 3D Structures]] | ||
| - | *[[ | + | *[[Tubulin tyrosine ligase|Tubulin tyrosine ligase]] |
== References == | == References == | ||
<references/> | <references/> | ||
| Line 29: | Line 29: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Bos taurus]] | [[Category: Bos taurus]] | ||
| - | [[Category: | + | [[Category: Gallus gallus]] |
| - | + | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Bargsten | + | [[Category: Rattus norvegicus]] |
| - | [[Category: Benkheil | + | [[Category: Bargsten K]] |
| - | [[Category: Bueno | + | [[Category: Benkheil M]] |
| - | [[Category: Camarasa | + | [[Category: Bueno O]] |
| - | [[Category: Canela | + | [[Category: Camarasa M-J]] |
| - | [[Category: Diaz | + | [[Category: Canela M-D]] |
| - | [[Category: Jimeno | + | [[Category: Diaz JF]] |
| - | [[Category: Liekens | + | [[Category: Jimeno M-L]] |
| - | [[Category: Noppen | + | [[Category: Liekens S]] |
| - | [[Category: Perez-Perez | + | [[Category: Noppen S]] |
| - | [[Category: Priego | + | [[Category: Perez-Perez M-J]] |
| - | [[Category: Prota | + | [[Category: Priego E-M]] |
| - | [[Category: Ribatti | + | [[Category: Prota AE]] |
| - | [[Category: Saez-Calvo | + | [[Category: Ribatti D]] |
| - | [[Category: Steinmetz | + | [[Category: Saez-Calvo G]] |
| - | [[Category: Velazquez | + | [[Category: Steinmetz MO]] |
| - | + | [[Category: Velazquez S]] | |
| - | + | ||
| - | + | ||
| - | + | ||
Revision as of 19:10, 20 September 2023
Tubulin-TUB092 complex
| |||||||||||
Categories: Bos taurus | Gallus gallus | Large Structures | Rattus norvegicus | Bargsten K | Benkheil M | Bueno O | Camarasa M-J | Canela M-D | Diaz JF | Jimeno M-L | Liekens S | Noppen S | Perez-Perez M-J | Priego E-M | Prota AE | Ribatti D | Saez-Calvo G | Steinmetz MO | Velazquez S
