This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5kbf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:57, 27 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5kbf' size='340' side='right'caption='[[5kbf]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='5kbf' size='340' side='right'caption='[[5kbf]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5kbf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Plaf7 Plaf7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KBF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KBF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5kbf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum_3D7 Plasmodium falciparum 3D7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KBF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5KBF FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CMP:ADENOSINE-3,5-CYCLIC-MONOPHOSPHATE'>CMP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5k8s|5k8s]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CMP:ADENOSINE-3,5-CYCLIC-MONOPHOSPHATE'>CMP</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PKAr, PF3D7_1223100, PFL1110c ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=36329 PLAF7])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5kbf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kbf OCA], [https://pdbe.org/5kbf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5kbf RCSB], [https://www.ebi.ac.uk/pdbsum/5kbf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5kbf ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/cAMP-dependent_protein_kinase cAMP-dependent protein kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.11 2.7.11.11] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5kbf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5kbf OCA], [http://pdbe.org/5kbf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5kbf RCSB], [http://www.ebi.ac.uk/pdbsum/5kbf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5kbf ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q7KQK0_PLAF7 Q7KQK0_PLAF7]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 27: Line 27:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Plaf7]]
+
[[Category: Plasmodium falciparum 3D7]]
-
[[Category: CAMP-dependent protein kinase]]
+
[[Category: Crabb BS]]
-
[[Category: Crabb, B S]]
+
[[Category: Gilson PR]]
-
[[Category: Gilson, P R]]
+
[[Category: Littler DR]]
-
[[Category: Littler, D R]]
+
[[Category: Rossjohn JJ]]
-
[[Category: Rossjohn, J J]]
+
-
[[Category: Camp]]
+
-
[[Category: Cbd]]
+
-
[[Category: Cnb]]
+
-
[[Category: Cyclic nucleotide binding]]
+
-
[[Category: Pka]]
+
-
[[Category: Plasmodium falciparum]]
+
-
[[Category: Protein kinase some]]
+
-
[[Category: Regulatory domain]]
+
-
[[Category: Transferase]]
+

Current revision

cAMP bound PfPKA-R (141-441)

PDB ID 5kbf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5kbf"
Personal tools