5ku7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:54, 27 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5ku7' size='340' side='right'caption='[[5ku7]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='5ku7' size='340' side='right'caption='[[5ku7]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5ku7]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Muscadine_grape Muscadine grape]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KU7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KU7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5ku7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vitis_rotundifolia Vitis rotundifolia]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KU7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5KU7 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLA:MALONIC+ACID'>MLA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RPV1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=103349 Muscadine grape])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLA:MALONIC+ACID'>MLA</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ku7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ku7 OCA], [http://pdbe.org/5ku7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ku7 RCSB], [http://www.ebi.ac.uk/pdbsum/5ku7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ku7 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ku7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ku7 OCA], [https://pdbe.org/5ku7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ku7 RCSB], [https://www.ebi.ac.uk/pdbsum/5ku7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ku7 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RPV1_VITRO RPV1_VITRO] Disease resistance (R) protein that confers resistance to multiple powdery and downy mildew by promoting cell death (PubMed:24033846, PubMed:28008335). Acts as a NAD(+) hydrolase (NADase): in response to activation, catalyzes cleavage of NAD(+) into ADP-D-ribose (ADPR) and nicotinamide; NAD(+) cleavage triggering a defense system that promotes cell death (PubMed:31439792).<ref>PMID:24033846</ref> <ref>PMID:28008335</ref> <ref>PMID:31439792</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 24:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Muscadine grape]]
+
[[Category: Vitis rotundifolia]]
-
[[Category: Ericsson, D J]]
+
[[Category: Ericsson DJ]]
-
[[Category: Kobe, B]]
+
[[Category: Kobe B]]
-
[[Category: Williams, S J]]
+
[[Category: Williams SJ]]
-
[[Category: Plant nlr]]
+
-
[[Category: Signaling protein]]
+
-
[[Category: Tir domain]]
+

Current revision

Crystal structure of the TIR domain from the Muscadinia rotundifolia disease resistance protein RPV1

PDB ID 5ku7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools