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5sv1

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Current revision (12:48, 4 October 2023) (edit) (undo)
 
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<StructureSection load='5sv1' size='340' side='right'caption='[[5sv1]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
<StructureSection load='5sv1' size='340' side='right'caption='[[5sv1]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5sv1]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecod1 Ecod1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5SV1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5SV1 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5sv1]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_DH1 Escherichia coli DH1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5SV1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5SV1 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5sv0|5sv0]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5sv1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5sv1 OCA], [https://pdbe.org/5sv1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5sv1 RCSB], [https://www.ebi.ac.uk/pdbsum/5sv1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5sv1 ProSAT]</span></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">exbB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=536056 ECOD1]), exbD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=536056 ECOD1])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5sv1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5sv1 OCA], [http://pdbe.org/5sv1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5sv1 RCSB], [http://www.ebi.ac.uk/pdbsum/5sv1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5sv1 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/EXBB_ECO57 EXBB_ECO57]] Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates. Protects ExbD from proteolytic degradation and functionally stabilizes TonB (By similarity). [[http://www.uniprot.org/uniprot/EXBD_ECO57 EXBD_ECO57]] Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates.
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[https://www.uniprot.org/uniprot/EXBB_ECOLI EXBB_ECOLI] Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates. Protects ExbD from proteolytic degradation and functionally stabilizes TonB.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Ecod1]]
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[[Category: Escherichia coli DH1]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Botos, I]]
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[[Category: Botos I]]
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[[Category: Buchanan, S K]]
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[[Category: Buchanan SK]]
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[[Category: Celia, H]]
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[[Category: Celia H]]
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[[Category: Lloubes, R]]
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[[Category: Lloubes R]]
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[[Category: Noinaj, N]]
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[[Category: Noinaj N]]
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[[Category: Channel]]
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[[Category: Exbb]]
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[[Category: Membrane protein]]
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[[Category: Pore]]
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[[Category: Transport protein]]
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Current revision

Structure of the ExbB/ExbD complex from E. coli at pH 4.5

PDB ID 5sv1

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