5u21

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:18, 4 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5u21' size='340' side='right'caption='[[5u21]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='5u21' size='340' side='right'caption='[[5u21]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5u21]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"campylobacter_fetus_subsp._jejuni"_smibert_1974 "campylobacter fetus subsp. jejuni" smibert 1974]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U21 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5U21 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5u21]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U21 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5U21 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=TQP:(2R,3R,4S,5S,6R)-3,5-DIHYDROXY-4-{[(1E)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLIDENE]AMINO}-6-METHYLTETRAHYDRO-2H-PYRAN-2-YL+[(2R,3S,5R)-3-HYDROXY-5-(5-METHYL-2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)TETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+DIPHOSPHATE'>TQP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5u1z|5u1z]], [[5u20|5u20]], [[5u23|5u23]], [[5u24|5u24]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=TQP:(2R,3R,4S,5S,6R)-3,5-DIHYDROXY-4-{[(1E)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLIDENE]AMINO}-6-METHYLTETRAHYDRO-2H-PYRAN-2-YL+[(2R,3S,5R)-3-HYDROXY-5-(5-METHYL-2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)TETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+DIPHOSPHATE'>TQP</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5u21 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u21 OCA], [http://pdbe.org/5u21 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5u21 RCSB], [http://www.ebi.ac.uk/pdbsum/5u21 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5u21 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5u21 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u21 OCA], [https://pdbe.org/5u21 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5u21 RCSB], [https://www.ebi.ac.uk/pdbsum/5u21 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5u21 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9ALS9_CAMJU Q9ALS9_CAMJU]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Campylobacter fetus subsp. jejuni smibert 1974]]
+
[[Category: Campylobacter jejuni]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Dow, G T]]
+
[[Category: Dow GT]]
-
[[Category: Gilbert, M]]
+
[[Category: Gilbert M]]
-
[[Category: Holden, H M]]
+
[[Category: Holden HM]]
-
[[Category: Thoden, J B]]
+
[[Category: Thoden JB]]
-
[[Category: Aminotransferase]]
+
-
[[Category: Lipooligosaccharide]]
+
-
[[Category: Pyridoxal 5'-phosphate]]
+
-
[[Category: Transferase]]
+

Current revision

X-ray structure of the WlaRF aminotransferase from Campylobacter jejuni, K184A mutant in complex with TDP-Qui3N

PDB ID 5u21

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools