5ubx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:24, 4 October 2023) (edit) (undo)
 
Line 1: Line 1:
==Crystal structure of a mutant mIgG2b Fc heterodimer in complex with Protein A peptide analog Z34C==
==Crystal structure of a mutant mIgG2b Fc heterodimer in complex with Protein A peptide analog Z34C==
-
<StructureSection load='5ubx' size='340' side='right' caption='[[5ubx]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
+
<StructureSection load='5ubx' size='340' side='right'caption='[[5ubx]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5ubx]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UBX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5UBX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5ubx]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UBX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5UBX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Igh-3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ubx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ubx OCA], [http://pdbe.org/5ubx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ubx RCSB], [http://www.ebi.ac.uk/pdbsum/5ubx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ubx ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ubx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ubx OCA], [https://pdbe.org/5ubx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ubx RCSB], [https://www.ebi.ac.uk/pdbsum/5ubx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ubx ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/IGG2B_MOUSE IGG2B_MOUSE]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Lk3 transgenic mice]]
+
[[Category: Large Structures]]
-
[[Category: Armstrong, A A]]
+
[[Category: Mus musculus]]
-
[[Category: Gilliland, G L]]
+
[[Category: Staphylococcus aureus]]
-
[[Category: Zwolak, A]]
+
[[Category: Armstrong AA]]
-
[[Category: B-domain]]
+
[[Category: Gilliland GL]]
-
[[Category: Fc complex]]
+
[[Category: Zwolak A]]
-
[[Category: Immune system]]
+
-
[[Category: Immunoglobulin fold]]
+
-
[[Category: Protein some]]
+
-
[[Category: Z-domain]]
+

Current revision

Crystal structure of a mutant mIgG2b Fc heterodimer in complex with Protein A peptide analog Z34C

PDB ID 5ubx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools