5v8t

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:43, 4 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5v8t' size='340' side='right'caption='[[5v8t]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='5v8t' size='340' side='right'caption='[[5v8t]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5v8t]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Burps Burps]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V8T OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5V8T FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5v8t]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_pseudomallei Burkholderia pseudomallei] and [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V8T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5V8T FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8ZV:2-{[3,5-bis(2-methoxyethoxy)benzene-1-carbonyl]amino}ethyl+(2S)-1-(benzylsulfonyl)piperidine-2-carboxylate'>8ZV</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">fbp_2, DP46_4351, DP49_3058, ERS012314_03208, SY87_03945 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272560 BURPS])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8ZV:2-{[3,5-bis(2-methoxyethoxy)benzene-1-carbonyl]amino}ethyl+(2S)-1-(benzylsulfonyl)piperidine-2-carboxylate'>8ZV</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidylprolyl_isomerase Peptidylprolyl isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.2.1.8 5.2.1.8] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5v8t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v8t OCA], [https://pdbe.org/5v8t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5v8t RCSB], [https://www.ebi.ac.uk/pdbsum/5v8t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5v8t ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5v8t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v8t OCA], [http://pdbe.org/5v8t PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5v8t RCSB], [http://www.ebi.ac.uk/pdbsum/5v8t PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5v8t ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/SMT3_YEAST SMT3_YEAST]] Not known; suppressor of MIF2 mutations.
+
[https://www.uniprot.org/uniprot/SMT3_YEAST SMT3_YEAST] Not known; suppressor of MIF2 mutations.[https://www.uniprot.org/uniprot/Q63J95_BURPS Q63J95_BURPS]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Burps]]
+
[[Category: Burkholderia pseudomallei]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Peptidylprolyl isomerase]]
+
[[Category: Saccharomyces cerevisiae S288C]]
-
[[Category: Abendroth, J]]
+
[[Category: Abendroth J]]
-
[[Category: Dranow, D M]]
+
[[Category: Dranow DM]]
-
[[Category: Holzgrabe, U]]
+
[[Category: Holzgrabe U]]
-
[[Category: Lorimer, D D]]
+
[[Category: Lorimer DD]]
-
[[Category: Seufert, F]]
+
[[Category: Seufert F]]
-
[[Category: Burkholderia]]
+
-
[[Category: Isomerase]]
+
-
[[Category: Peptidyl]]
+
-
[[Category: Proline]]
+

Current revision

Crystal structure of SMT fusion Peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with SF354

PDB ID 5v8t

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools