5vvm

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<StructureSection load='5vvm' size='340' side='right'caption='[[5vvm]], [[Resolution|resolution]] 3.54&Aring;' scene=''>
<StructureSection load='5vvm' size='340' side='right'caption='[[5vvm]], [[Resolution|resolution]] 3.54&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5vvm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VVM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VVM FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5vvm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VVM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VVM FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.54&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CDH23, KIAA1774, KIAA1812, UNQ1894/PRO4340 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vvm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vvm OCA], [https://pdbe.org/5vvm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vvm RCSB], [https://www.ebi.ac.uk/pdbsum/5vvm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vvm ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vvm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vvm OCA], [https://pdbe.org/5vvm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vvm RCSB], [https://www.ebi.ac.uk/pdbsum/5vvm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vvm ProSAT]</span></td></tr>
</table>
</table>
== Disease ==
== Disease ==
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[[https://www.uniprot.org/uniprot/CAD23_HUMAN CAD23_HUMAN]] Defects in CDH23 are the cause of Usher syndrome type 1D (USH1D) [MIM:[https://omim.org/entry/601067 601067]]. USH is a genetically heterogeneous condition characterized by the association of retinitis pigmentosa and sensorineural deafness. Age at onset and differences in auditory and vestibular function distinguish Usher syndrome type 1 (USH1), Usher syndrome type 2 (USH2) and Usher syndrome type 3 (USH3). USH1 is characterized by profound congenital sensorineural deafness, absent vestibular function and prepubertal onset of progressive retinitis pigmentosa leading to blindness.<ref>PMID:11138009</ref> <ref>PMID:12075507</ref> <ref>PMID:15660226</ref> <ref>PMID:15537665</ref> <ref>PMID:16679490</ref> <ref>PMID:18429043</ref> Defects in CDH23 are a cause of Usher syndrome type 1D/F (USH1DF) [MIM:[https://omim.org/entry/601067 601067]]. USH1DF patients are heterozygous for mutations in CDH23 and PCDH15, indicating a digenic inheritance pattern.<ref>PMID:15537665</ref> Defects in CDH23 are the cause of deafness autosomal recessive type 12 (DFNB12) [MIM:[https://omim.org/entry/601386 601386]]. DFNB12 is a form of sensorineural hearing loss. Sensorineural deafness results from damage to the neural receptors of the inner ear, the nerve pathways to the brain, or the area of the brain that receives sound information.<ref>PMID:12075507</ref> <ref>PMID:16679490</ref> <ref>PMID:11090341</ref> <ref>PMID:12522556</ref> <ref>PMID:15829536</ref> <ref>PMID:17850630</ref>
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[https://www.uniprot.org/uniprot/CAD23_HUMAN CAD23_HUMAN] Defects in CDH23 are the cause of Usher syndrome type 1D (USH1D) [MIM:[https://omim.org/entry/601067 601067]. USH is a genetically heterogeneous condition characterized by the association of retinitis pigmentosa and sensorineural deafness. Age at onset and differences in auditory and vestibular function distinguish Usher syndrome type 1 (USH1), Usher syndrome type 2 (USH2) and Usher syndrome type 3 (USH3). USH1 is characterized by profound congenital sensorineural deafness, absent vestibular function and prepubertal onset of progressive retinitis pigmentosa leading to blindness.<ref>PMID:11138009</ref> <ref>PMID:12075507</ref> <ref>PMID:15660226</ref> <ref>PMID:15537665</ref> <ref>PMID:16679490</ref> <ref>PMID:18429043</ref> Defects in CDH23 are a cause of Usher syndrome type 1D/F (USH1DF) [MIM:[https://omim.org/entry/601067 601067]. USH1DF patients are heterozygous for mutations in CDH23 and PCDH15, indicating a digenic inheritance pattern.<ref>PMID:15537665</ref> Defects in CDH23 are the cause of deafness autosomal recessive type 12 (DFNB12) [MIM:[https://omim.org/entry/601386 601386]. DFNB12 is a form of sensorineural hearing loss. Sensorineural deafness results from damage to the neural receptors of the inner ear, the nerve pathways to the brain, or the area of the brain that receives sound information.<ref>PMID:12075507</ref> <ref>PMID:16679490</ref> <ref>PMID:11090341</ref> <ref>PMID:12522556</ref> <ref>PMID:15829536</ref> <ref>PMID:17850630</ref>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/CAD23_HUMAN CAD23_HUMAN]] Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells. CDH23 is required for establishing and/or maintaining the proper organization of the stereocilia bundle of hair cells in the cochlea and the vestibule during late embryonic/early postnatal development. It is part of the functional network formed by USH1C, USH1G, CDH23 and MYO7A that mediates mechanotransduction in cochlear hair cells. Required for normal hearing.
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[https://www.uniprot.org/uniprot/CAD23_HUMAN CAD23_HUMAN] Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells. CDH23 is required for establishing and/or maintaining the proper organization of the stereocilia bundle of hair cells in the cochlea and the vestibule during late embryonic/early postnatal development. It is part of the functional network formed by USH1C, USH1G, CDH23 and MYO7A that mediates mechanotransduction in cochlear hair cells. Required for normal hearing.
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== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Jaiganesh, A]]
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[[Category: Jaiganesh A]]
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[[Category: Patel, A]]
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[[Category: Patel A]]
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[[Category: Sotomayor, M]]
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[[Category: Sotomayor M]]
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[[Category: Adhesion]]
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[[Category: Calcium-binding protein]]
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[[Category: Cell adhesion]]
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[[Category: Hearing]]
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[[Category: Mechanotransduction]]
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Current revision

Crystal structure of human CDH23 EC21-23

PDB ID 5vvm

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